RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SLX4Q8IY92 1834 aa2.14□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CEP152O94986 1710 aa2.14□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SHANK3Q9BYB0 1731 aa2.14□□□□□ -2.07
RNU6-1249P-201ENST00000363237 PRR14LQ5THK1 2151 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TOPBP1Q92547 1522 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 DUXBA0A1W2PPF3 345 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 BUB1B-PAK6H3BSN5 160 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 C19orf84I3L1E1 186 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF73O43830 326 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 HMGN1P05114 100 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CSN2P05814 226 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CCL5P13501 91 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF14P17017 642 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 PSMB8P28062 276 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF80P51504 273 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LINC00315P59091 139 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 YPEL3P61236 119 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF767PQ75MW2 155 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SH2D6Q7Z4S9 175 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TRAPPC6BQ86SZ2 158 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 OR10J5Q8NHC4 309 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 FGF13Q92913 245 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TM2D3Q9BRN9 247 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CCDC32Q9BV29 185 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 OR8D2Q9GZM6 311 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TUBA4BQ9H853 241 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LAMTOR3Q9UHA4 124 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ERGIC3Q9Y282 383 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 WDR90Q96KV7 1748 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 NUP210LQ5VU65 1888 aa2.13□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TRGV5A0A0B4J1U4 118 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 A0A1B0GVY2 172 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TRAPPC2LH3BP13 241 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CYB5BO43169 146 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 DHFRP00374 187 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF728P0DKX0 622 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 PSMD8P48556 350 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 EMP1P54849 157 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TPI1P60174 286 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SMCO1Q147U7 214 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SURF2Q15527 256 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 RRN3P1Q2M238 152 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 DYNAPQ8N1N2 210 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 EXOC3-AS1Q8N2X6 119 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF561Q8N587 486 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 TERB2Q8NHR7 220 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CMTM2Q8TAZ6 248 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 MBD3L1Q8WWY6 194 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 RMND5BQ96G75 393 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LINC00167Q96N53 147 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SCGB3A1Q96QR1 104 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 EFCAB11Q9BUY7 163 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 RTL8AQ9BWD3 113 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 RBM7Q9Y580 266 aaKnown RBP2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ATRXP46100 2492 aa2.12□□□□□ -2.07
RNU6-1249P-201ENST00000363237 MDFIC2A0A1B0GVS7 189 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 KPNA4O00629 521 aaPredicted RBP2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 GNRH2O43555 120 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 FAM107AO95990 144 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 HRES1P13985 223 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 NFYAP23511 347 aaPredicted RBP2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SRIP30626 198 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 GTF2A1P52655 376 aaPredicted RBP2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LINC01554Q52M75 96 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 MIR17HGQ75NE6 70 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LHFPL1Q86WI0 220 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ANGPTL5Q86XS5 388 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 OR9Q1Q8NGQ5 310 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 OR5C1Q8NGR4 320 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 DNAJC9Q8WXX5 260 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 C11orf40Q8WZ69 217 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 RSPO3Q9BXY4 272 aaPredicted RBP2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 OR2J1Q9GZK6 312 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SPANXCQ9NY87 97 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 MED11Q9P086 117 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CAMSAP2Q08AD1 1489 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF407Q9C0G0 2248 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 GREB1Q4ZG55 1949 aa2.11□□□□□ -2.07
RNU6-1249P-201ENST00000363237 NCAPD3P42695 1498 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ARAP1Q96P48 1450 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 A0A087X0T9 212 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ARL5CA6NH57 179 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 ZNF860A6NHJ4 632 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 C11orf86A6NJI1 115 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 SLC22A1O15245 554 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 GGCTO75223 188 aaKnown RBP2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 PPBPP02775 128 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 IGKV3-11P04433 115 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 BPGMP07738 259 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 OGNP20774 298 aaKnown RBP2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 RPL28P46779 137 aaKnown RBP2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LTC4SQ16873 150 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 LYZL1Q6UWQ5 148 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CROCCP2Q86T23 111 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 MSRB3Q8IXL7 192 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 HIST3H2BBQ8N257 126 aa2.1□□□□□ -2.07
RNU6-1249P-201ENST00000363237 CANT1Q8WVQ1 401 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms