RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 TEX50A0A1B0GTY4 177 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 NDUFB3O43676 98 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 TYMSP04818 313 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 RANP62826 216 aaKnown RBP15.1■□□□□ 0.01
LRP3-201ENST00000253193 SEM1Q6ZVN7 128 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 TMEM144Q7Z5S9 345 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 NPIPB3Q92617 1050 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 SRRM4A7MD48 611 aaKnown RBP15.1■□□□□ 0.01
LRP3-201ENST00000253193 F2Z2F3 143 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 KRTCAP3Q53RY4 240 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 IBA57Q5T440 356 aaKnown RBP15.1■□□□□ 0.01
LRP3-201ENST00000253193 ZCCHC14Q8WYQ9 949 aaKnown RBP15.1■□□□□ 0.01
LRP3-201ENST00000253193 ASCL3Q9NQ33 180 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 TMEM14BQ9NUH8 114 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 ZNF586Q9NXT0 402 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 PLXNB1O43157 2135 aa15.1■□□□□ 0.01
LRP3-201ENST00000253193 TRGV8A0A0C4DH27 118 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 CT45A6P0DMU7 189 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 CT45A5P0DMU8 189 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 CT45A7P0DMV0 189 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 CAMPP49913 170 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 LBHQ53QV2 105 aaPredicted RBP15.09■□□□□ 0.01
LRP3-201ENST00000253193 ZNF714Q96N38 554 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 VAMP8Q9BV40 100 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 SPTBN1Q01082 2364 aaKnown RBP15.09■□□□□ 0.01
LRP3-201ENST00000253193 CRYABP02511 175 aaKnown RBP15.09■□□□□ 0.01
LRP3-201ENST00000253193 SUB1P53999 127 aaKnown RBP eCLIP15.09■□□□□ 0.01
LRP3-201ENST00000253193 Q8N7P7 452 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 C8orf88P0DMB2 117 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 PLGLAQ15195 96 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 GUSBP1Q15486 140 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 GAFA1Q96PS6 74 aa15.09■□□□□ 0.01
LRP3-201ENST00000253193 MBD3L4A6NDZ8 208 aaPredicted RBP15.08■□□□□ 0.01
LRP3-201ENST00000253193 MBD3L3A6NE82 208 aaPredicted RBP15.08■□□□□ 0.01
LRP3-201ENST00000253193 MBD3L5A6NJ08 208 aaPredicted RBP15.08■□□□□ 0.01
LRP3-201ENST00000253193 K7EN84 100 aa15.08■□□□□ 0.01
LRP3-201ENST00000253193 M0R143 59 aa15.08■□□□□ 0.01
LRP3-201ENST00000253193 SLC25A17O43808 307 aa15.08■□□□□ 0.01
LRP3-201ENST00000253193 UBE2G1P62253 170 aa15.08■□□□□ 0.01
LRP3-201ENST00000253193 PRCDQ00LT1 54 aa15.08■□□□□ 0.01
LRP3-201ENST00000253193 PRR31Q5SQ13 230 aa15.08■□□□□ 0.01
LRP3-201ENST00000253193 MBD3L2Q8NHZ7 208 aaPredicted RBP15.08■□□□□ 0.01
LRP3-201ENST00000253193 LRRC10Q5BKY1 277 aa15.08■□□□□ 0
LRP3-201ENST00000253193 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.08■□□□□ 0
LRP3-201ENST00000253193 RPUSD1Q9UJJ7 312 aaKnown RBP15.08■□□□□ 0
LRP3-201ENST00000253193 WNK2Q9Y3S1 2297 aa15.08■□□□□ 0
LRP3-201ENST00000253193 TNRC6BQ9UPQ9 1833 aaKnown RBP15.08■□□□□ 0
LRP3-201ENST00000253193 C16orf97H3BN30 126 aa15.08■□□□□ 0
LRP3-201ENST00000253193 H3BTX0 84 aa15.08■□□□□ 0
LRP3-201ENST00000253193 CDKN1AP38936 164 aa15.08■□□□□ 0
LRP3-201ENST00000253193 OR1B1Q8NGR6 318 aa15.08■□□□□ 0
LRP3-201ENST00000253193 C22orf15Q8WYQ4 148 aa15.08■□□□□ 0
LRP3-201ENST00000253193 LINC00479Q96M42 142 aa15.08■□□□□ 0
LRP3-201ENST00000253193 DCHS1Q96JQ0 3298 aa15.08■□□□□ 0
LRP3-201ENST00000253193 PYYP10082 97 aa15.07■□□□□ 0
LRP3-201ENST00000253193 C10orf113Q5VZT2 155 aa15.07■□□□□ 0
LRP3-201ENST00000253193 TMEM68Q96MH6 324 aa15.07■□□□□ 0
LRP3-201ENST00000253193 DNAJC4Q9NNZ3 241 aa15.07■□□□□ 0
LRP3-201ENST00000253193 LSM4Q9Y4Z0 139 aaKnown RBP15.07■□□□□ 0
LRP3-201ENST00000253193 KMT2EQ8IZD2 1858 aa15.07■□□□□ 0
LRP3-201ENST00000253193 TDGF1P3P51864 188 aa15.07■□□□□ 0
LRP3-201ENST00000253193 CFAP47Q6ZTR5 3102 aa15.07■□□□□ 0
LRP3-201ENST00000253193 PPIAL4EA0A075B759 164 aa15.06■□□□□ 0
LRP3-201ENST00000253193 PPIAL4DF5H284 164 aa15.06■□□□□ 0
LRP3-201ENST00000253193 PPIAL4FP0DN26 164 aa15.06■□□□□ 0
LRP3-201ENST00000253193 C1orf194Q5T5A4 169 aa15.06■□□□□ 0
LRP3-201ENST00000253193 Q6ZWC4 215 aa15.06■□□□□ 0
LRP3-201ENST00000253193 PAXXQ9BUH6 204 aa15.06■□□□□ 0
LRP3-201ENST00000253193 PPIAL4AQ9Y536 164 aa15.06■□□□□ 0
LRP3-201ENST00000253193 FAM215AQ9Y5M1 114 aa15.06■□□□□ 0
LRP3-201ENST00000253193 BPIFB3P59826 476 aa15.06■□□□□ 0
LRP3-201ENST00000253193 TP53TG3Q9ULZ0 132 aa15.06■□□□□ 0
LRP3-201ENST00000253193 USF1P22415 310 aaPredicted RBP15.06■□□□□ 0
LRP3-201ENST00000253193 SRIP30626 198 aa15.06■□□□□ 0
LRP3-201ENST00000253193 OR5B3Q8NH48 314 aa15.06■□□□□ 0
LRP3-201ENST00000253193 SLC25A5P05141 298 aaKnown RBP15.05■□□□□ 0
LRP3-201ENST00000253193 MFAP2P55001 183 aa15.05■□□□□ 0
LRP3-201ENST00000253193 DDB2Q92466 427 aa15.05■□□□□ 0
LRP3-201ENST00000253193 BORCS7Q96B45 105 aa15.05■□□□□ 0
LRP3-201ENST00000253193 ZNF355PQ9NSJ1 428 aa15.05■□□□□ 0
LRP3-201ENST00000253193 TMEM106BQ9NUM4 274 aa15.05■□□□□ 0
LRP3-201ENST00000253193 SPENQ96T58 3664 aaKnown RBP15.05■□□□□ 0
LRP3-201ENST00000253193 CFHR2P36980 270 aa15.05■□□□□ -0
LRP3-201ENST00000253193 C22orf34Q6ZV56 151 aa15.05■□□□□ -0
LRP3-201ENST00000253193 ST6GALNAC3Q8NDV1 305 aa15.05■□□□□ -0
LRP3-201ENST00000253193 SFXN3Q9BWM7 321 aa15.05■□□□□ -0
LRP3-201ENST00000253193 AMMECR1Q9Y4X0 333 aaPredicted RBP15.05■□□□□ -0
LRP3-201ENST00000253193 SPTAN1Q13813 2472 aaKnown RBP15.05■□□□□ -0
LRP3-201ENST00000253193 MOSP00540 346 aa15.05■□□□□ -0
LRP3-201ENST00000253193 TMPRSS3P57727 454 aa15.05■□□□□ -0
LRP3-201ENST00000253193 GFRALQ6UXV0 394 aa15.05■□□□□ -0
LRP3-201ENST00000253193 ZNF835Q9Y2P0 537 aa15.05■□□□□ -0
LRP3-201ENST00000253193 DLL1O00548 723 aa15.04■□□□□ -0
LRP3-201ENST00000253193 NPSP0C0P6 89 aa15.04■□□□□ -0
LRP3-201ENST00000253193 PAFAH1B2P68402 229 aa15.04■□□□□ -0
LRP3-201ENST00000253193 TNXAQ16473 311 aa15.04■□□□□ -0
LRP3-201ENST00000253193 VMA21Q3ZAQ7 101 aa15.04■□□□□ -0
LRP3-201ENST00000253193 TMEM183BQ1AE95 376 aa15.04■□□□□ -0
LRP3-201ENST00000253193 WDR73Q6P4I2 378 aa15.04■□□□□ -0
LRP3-201ENST00000253193 ZNF788Q6ZQV5 615 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms