RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SUB1P53999 127 aaKnown RBP eCLIP9.67□□□□□ -0.86
TGFB1-204ENST00000600196 PROK1P58294 105 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 TAS2R30P59541 319 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 CFHR3Q02985 330 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 FOXE3Q13461 319 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 CENPVQ7Z7K6 275 aaPredicted RBP9.67□□□□□ -0.86
TGFB1-204ENST00000600196 ZNF114Q8NC26 417 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 OR1S1Q8NH92 325 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 FAM110DQ8TAY7 271 aaPredicted RBP9.67□□□□□ -0.86
TGFB1-204ENST00000600196 FYTTD1Q96QD9 318 aaKnown RBP9.67□□□□□ -0.86
TGFB1-204ENST00000600196 ATP6V0BQ99437 205 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 MED28Q9H204 178 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 ENY2Q9NPA8 101 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 RNF114Q9Y508 228 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 ALG5Q9Y673 324 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 U3KQ87 197 aa9.67□□□□□ -0.86
TGFB1-204ENST00000600196 TEX22C9J3V5 150 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 IGLV1-40P01703 118 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 PSMB6P28072 239 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 RPP30P78346 268 aaKnown RBP9.66□□□□□ -0.86
TGFB1-204ENST00000600196 IL15RAQ13261 267 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 IAH1Q2TAA2 248 aaPredicted RBP9.66□□□□□ -0.86
TGFB1-204ENST00000600196 UNQ5815/PRO19632Q6UWF5 114 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 OR2C3Q8N628 320 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 ZBTB8BQ8NAP8 495 aaPredicted RBP9.66□□□□□ -0.86
TGFB1-204ENST00000600196 UXS1Q8NBZ7 420 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 OR4D5Q8NGN0 318 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 RAB40CQ96S21 281 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 HIPK2Q9H2X6 1198 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 PLEKHA3Q9HB20 300 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 PARP11Q9NR21 331 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 THYN1Q9P016 225 aa9.66□□□□□ -0.86
TGFB1-204ENST00000600196 IGLC7A0M8Q6 106 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 PSMB11A5LHX3 300 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 C5orf51A6NDU8 294 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 CORTO00230 105 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 ADAP1O75689 374 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 CTRB1P17538 263 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 HTR2BP41595 481 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 NKX2-1P43699 371 aaPredicted RBP9.65□□□□□ -0.86
TGFB1-204ENST00000600196 RRAS2P62070 204 aaPredicted RBP9.65□□□□□ -0.86
TGFB1-204ENST00000600196 GNB1P62873 340 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 KRTAP24-1Q3LI83 254 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 PVRIGQ6DKI7 326 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 CTRB2Q6GPI1 263 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 Q6ZS46 218 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.65□□□□□ -0.86
TGFB1-204ENST00000600196 LFNGQ8NES3 379 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 OR4X2Q8NGF9 303 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 OR1P1Q8NH06 330 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 GRPEL2Q8TAA5 225 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 PRR13Q9NZ81 148 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 NSG2Q9Y328 171 aa9.65□□□□□ -0.86
TGFB1-204ENST00000600196 ATRQ13535 2644 aa9.65□□□□□ -0.87
TGFB1-204ENST00000600196 A0A0G2JLM5 398 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 CGB1A6NKQ9 187 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 SYNGR2O43760 224 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 SNCAP37840 140 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 NDPQ00604 133 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 KLHDC1Q8N7A1 406 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 ABHD5Q8WTS1 349 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 CHAC2Q8WUX2 184 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 FBXO7Q9Y3I1 522 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 PLXNB1O43157 2135 aa9.64□□□□□ -0.87
TGFB1-204ENST00000600196 TRBV9A0A0B4J1U6 114 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 C13orf42A0A1B0GVH6 325 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 FBXO24O75426 580 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 OPN1MWP04001 364 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 RLN2P04090 185 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 PET100P0DJ07 73 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 OPN1MW2P0DN77 364 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 OPN1MW3P0DN78 364 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 OR13C7P0DN81 318 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 PVALBP20472 110 aaPredicted RBP9.63□□□□□ -0.87
TGFB1-204ENST00000600196 PSMB8P28062 276 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 FGL1Q08830 312 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 CXorf66Q5JRM2 361 aaPredicted RBP9.63□□□□□ -0.87
TGFB1-204ENST00000600196 ASPHD1Q5U4P2 390 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 TMEM65Q6PI78 240 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 NECAP1Q8NC96 275 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 MYOZ3Q8TDC0 251 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 DTD1Q8TEA8 209 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 RBMXL1Q96E39 390 aaKnown RBP9.63□□□□□ -0.87
TGFB1-204ENST00000600196 SMIM8Q96KF7 97 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 C19orf24Q9BVV8 132 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 F11RQ9Y624 299 aaKnown RBP9.63□□□□□ -0.87
TGFB1-204ENST00000600196 WSB1Q9Y6I7 421 aa9.63□□□□□ -0.87
TGFB1-204ENST00000600196 A0A1B0GW64 132 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 HMX3A6NHT5 357 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 SH2D7A6NKC9 451 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms