RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 OR4X1Q8NH49 305 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TSPAN32Q96QS1 320 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 FAM96AQ9H5X1 160 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TP73-AS1Q9UF72 201 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF106Q9H2Y7 1883 aaKnown RBP1.68□□□□□ -2.14
SCFD1-221ENST00000556534 KIF21BO75037 1637 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 NHSL1Q5SYE7 1610 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 SCN10AQ9Y5Y9 1956 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 ROBO3Q96MS0 1386 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 TEX14Q8IWB6 1497 aa1.68□□□□□ -2.14
SCFD1-221ENST00000556534 CFAP43Q8NDM7 1665 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 NUP160Q12769 1436 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 COL4A2P08572 1712 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 BCORL1Q5H9F3 1711 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 TRBV20OR9-2A0A075B6H5 130 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 MUC21A0A0G2JKD1 596 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 MUC21A0A140T8X8 626 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 J3QKU1 62 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 SRP19P09132 144 aaKnown RBP1.67□□□□□ -2.14
SCFD1-221ENST00000556534 CST2P09228 141 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 CSRP1P21291 193 aaKnown RBP1.67□□□□□ -2.14
SCFD1-221ENST00000556534 ALDH3A1P30838 453 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 S100A5P33763 92 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 PPP1R2P41236 205 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 ARF6P62330 175 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 POLR2GP62487 172 aaKnown RBP eCLIP1.67□□□□□ -2.14
SCFD1-221ENST00000556534 SS18Q15532 418 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 TAF1AQ15573 450 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-221ENST00000556534 GRK1Q15835 563 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 GLT8D1Q68CQ7 371 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 PPP1R2P3Q6NXS1 205 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 Q8NDZ9 215 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 WDR61Q9GZS3 305 aaKnown RBP1.67□□□□□ -2.14
SCFD1-221ENST00000556534 RNASE7Q9H1E1 156 aaKnown RBP1.67□□□□□ -2.14
SCFD1-221ENST00000556534 TUBA4BQ9H853 241 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 C14orf105Q9NVL8 296 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 PSORS1C2Q9UIG4 136 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 PLXNA3P51805 1871 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 BAHCC1Q9P281 2608 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 MPDZO75970 2070 aa1.67□□□□□ -2.14
SCFD1-221ENST00000556534 RGS12O14924 1447 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 RAPGEF6Q8TEU7 1601 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 MUC6Q6W4X9 2439 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 TRGV5A0A0B4J1U4 118 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 hADV38S2A0JD32 116 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 TXNDC9O14530 226 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 LEPROTO15243 131 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 BPGMP07738 259 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 TFPTP0C1Z6 253 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF705DP0CH99 300 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 CYBAP13498 195 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 S100A7P31151 101 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 CA5AP35218 305 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 FXYD7P58549 80 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 HIST1H3AP68431 136 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 H3F3AP84243 136 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 MIAQ16674 131 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 IAH1Q2TAA2 248 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 TMEM42Q69YG0 159 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 TBC1D19Q8N5T2 526 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 ANKRD29Q8N6D5 301 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 OR10X1Q8NGY0 326 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 MRPL30Q8TCC3 161 aaKnown RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 SIGMAR1Q99720 223 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 TMEM147Q9BVK8 224 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 ULBP3Q9BZM4 244 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 OR8D2Q9GZM6 311 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 C11orf68Q9H3H3 251 aaKnown RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 EFCAB1Q9HAE3 211 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 PRTFDC1Q9NRG1 225 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 DOK5Q9P104 306 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 FUT9Q9Y231 359 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 ARL2BPQ9Y2Y0 163 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 NUP155O75694 1391 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 BCL9LQ86UU0 1499 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 MAGI1Q96QZ7 1491 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 MYH11P35749 1972 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 MYO9BQ13459 2157 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 GOLGB1Q14789 3259 aaKnown RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 NCKAP5O14513 1909 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 EPRSP07814 1512 aaKnown RBP1.66□□□□□ -2.14
SCFD1-221ENST00000556534 LRRC7Q96NW7 1537 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 KIAA0586Q9BVV6 1533 aa1.66□□□□□ -2.14
SCFD1-221ENST00000556534 FAM159BA6NKW6 160 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 NOS1APO75052 506 aaPredicted RBP1.65□□□□□ -2.15
SCFD1-221ENST00000556534 IGKV1-5P01602 117 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 GZMHP20718 246 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 CSN1S1P47710 185 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 HES1Q14469 280 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 TMED2Q15363 201 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 SPA17Q15506 151 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 FAM173BQ6P4H8 233 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 LHFPL1Q86WI0 220 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 OR52L1Q8NGH7 329 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 OR51T1Q8NGJ9 327 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 BORCS7Q96B45 105 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 NIPSNAP1Q9BPW8 284 aa1.65□□□□□ -2.15
SCFD1-221ENST00000556534 TRIM4Q9C037 500 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms