RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CBLN1P23435 193 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 RELBQ01201 579 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 RAB31Q13636 194 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 KCNIP4Q6PIL6 250 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 HARBI1Q96MB7 349 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 P2RX4Q99571 388 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 J3QW42 95 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 OR10J1P30954 320 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 LGALS4P56470 323 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 FOXC1Q12948 553 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 HCP5Q6MZN7 132 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 TEPPQ6URK8 271 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 OR9G1Q8NH87 305 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 YPEL4Q96NS1 127 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 COMMD5Q9GZQ3 224 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 JPT1Q9UK76 154 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 WDR83OSQ9Y284 106 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 TM4SF5O14894 197 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 RBFOX2O43251 390 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 HRASP01112 189 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 OR5G3P0C626 314 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 CRYBB3P26998 211 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 GLRXP35754 106 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 LOXL3P58215 753 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 GFRALQ6UXV0 394 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 KDF1Q8NAX2 398 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 SRRM4A7MD48 611 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 CD40P25942 277 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 S100A12P80511 92 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 SAP30LQ9HAJ7 183 aa11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-209ENST00000548825 KBTBD11-OT1A0A1B0GTJ5 212 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 PRRG2O14669 202 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 C1orf185Q5T7R7 199 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 OCC1Q8TAD7 63 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 CREBBPQ92793 2442 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 CA1P00915 261 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 TIMM23BQ5SRD1 257 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 DCHS2Q6V1P9 2916 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 DYSFO75923 2080 aa11.23□□□□□ -0.61
PRPF40B-209ENST00000548825 TRAV5A0A0B4J249 113 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 IL3RAP26951 378 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 OPRK1P41145 380 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 C17orf58Q2M2W7 97 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 MBNL2Q5VZF2 373 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 BLNKQ8WV28 456 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 TMEM170AQ8WVE7 144 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 ZMAT5Q9UDW3 170 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 IGLV1-44P01699 117 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 IER3P46695 156 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 HTD2P86397 168 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 HLA-DRB5Q30154 266 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 OR1P1Q8NH06 330 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 CENPEQ02224 2701 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 LY6HO94772 140 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 COX7A1P24310 79 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 EFNB3Q15768 340 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 RTL8BQ17RB0 113 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 TMEM108Q6UXF1 575 aa11.22□□□□□ -0.61
PRPF40B-209ENST00000548825 A0A087X0M5 115 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 A0A1B0GX30 115 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 TMEM250H0YL14 139 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 C1orf162Q8NEQ5 155 aaPredicted RBP11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 PRR7Q8TB68 274 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 LINC00479Q96M42 142 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 RNASE7Q9H1E1 156 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.61
PRPF40B-209ENST00000548825 TRAV34A0A0B4J273 112 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 TSTD3H0UI37 97 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 YPEL1O60688 119 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 AMBPP02760 352 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 ORM2P19652 201 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 TIMP3P35625 211 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 YPEL2Q96QA6 119 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 CTDSP1Q9GZU7 261 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 SRD5A3Q9H8P0 318 aa11.21□□□□□ -0.62
PRPF40B-209ENST00000548825 TRGV8A0A0C4DH27 118 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms