RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TRAPPC2P0DI81 140 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 TRAPPC2BP0DI82 140 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 SULT1A3P0DMM9 295 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 SULT1A4P0DMN0 295 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 AREGP15514 252 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 PSMB8P28062 276 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 FOXE3Q13461 319 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 RGS21Q2M5E4 152 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 GGNBP1Q5YKI7 109 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 TEX38Q6PEX7 206 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 LCNL1Q6ZST4 164 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 C12orf45Q8N5I9 185 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-206ENST00000470241 TTC9CQ8N5M4 171 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 COMMD1Q8N668 190 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 C3orf56Q8N813 242 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 RNF152Q8N8N0 203 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 OR5T1Q8NG75 326 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 OR10W1Q8NGF6 305 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 OR4X2Q8NGF9 303 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 OR5M8Q8NGP6 311 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 FAM110DQ8TAY7 271 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-206ENST00000470241 CITED1Q99966 193 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 CITED2Q99967 270 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-206ENST00000470241 SRSF8Q9BRL6 282 aaKnown RBP8.25□□□□□ -1.09
SMC1A-206ENST00000470241 HINT2Q9BX68 163 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 KLK15Q9H2R5 256 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.25□□□□□ -1.09
SMC1A-206ENST00000470241 COA4Q9NYJ1 87 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 COL6A5A8TX70 2615 aa8.25□□□□□ -1.09
SMC1A-206ENST00000470241 A0A1B0GU03 582 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 NPIPB5A8MRT5 1133 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 MPTX1A8MV57 137 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 SNRPGP15A8MWD9 76 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 PRAF2O60831 178 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 PITX3O75364 302 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 FBXO24O75426 580 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 DHFRP00374 187 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 CRYGCP07315 174 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 ELANEP08246 267 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 PSMB6P28072 239 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 PRCDQ00LT1 54 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 CD83Q01151 205 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 WT1-ASQ06250 92 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 SMCO1Q147U7 214 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 OXA1LQ15070 435 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 SPINK9Q5DT21 86 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 THOC7Q6I9Y2 204 aaKnown RBP8.24□□□□□ -1.09
SMC1A-206ENST00000470241 C19orf35Q6ZS72 473 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 OR52E5Q8NH55 327 aa8.24□□□□□ -1.09
SMC1A-206ENST00000470241 GPN1Q9HCN4 374 aaPredicted RBP8.24□□□□□ -1.09
SMC1A-206ENST00000470241 PLXNB1O43157 2135 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 C7orf66A4D0T2 115 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 BRI3O95415 125 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 IFNA17P01571 189 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
SMC1A-206ENST00000470241 REG1AP05451 166 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 OR13C7P0DN81 318 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 PF4V1P10720 104 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 SLC25A6P12236 298 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 CTRB1P17538 263 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 SPCS3P61009 180 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 KIAA0141Q14154 515 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-206ENST00000470241 PDLIM3Q53GG5 364 aaPredicted RBP8.23□□□□□ -1.09
SMC1A-206ENST00000470241 CTRB2Q6GPI1 263 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 SHISA2Q6UWI4 295 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 MYOZ3Q8TDC0 251 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 MS4A10Q96PG2 267 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
SMC1A-206ENST00000470241 TNCP24821 2201 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 TCRBV4S1A1TA0A5B7 111 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 H3BUA1 57 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 CCSO14618 274 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 NXPH3O95157 252 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 IFNA21P01568 189 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 PRH1P02810 166 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 RAB9AP51151 201 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 TATDN3Q17R31 274 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 C2orf68Q2NKX9 166 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 KLK9Q2XQG4 91 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 CXorf66Q5JRM2 361 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-206ENST00000470241 C18orf65Q6ZTR6 163 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 HSD17B13Q7Z5P4 300 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-206ENST00000470241 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 UXS1Q8NBZ7 420 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 OR1S1Q8NH92 325 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 SPATA3Q8NHX4 192 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 OR10C1Q96KK4 312 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 PDCD10Q9BUL8 212 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 ZNF355PQ9NSJ1 428 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 HSPB7Q9UBY9 170 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 KLK9Q9UKQ9 250 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 DMRT1Q9Y5R6 373 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 ALG5Q9Y673 324 aa8.22□□□□□ -1.09
SMC1A-206ENST00000470241 ANK2Q01484 3957 aa8.21□□□□□ -1.09
SMC1A-206ENST00000470241 TRBV9A0A0B4J1U6 114 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 TRGV3P03979 118 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 HOXA1P49639 335 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms