RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 ABCA4P78363 2273 aa13.6□□□□□ -0.23
PGAP3-201ENST00000300658 CHD8Q9HCK8 2581 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 SAA2-SAA4A0A096LPE2 208 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 CCL25O15444 150 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 GFRA3O60609 400 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 SAA2P0DJI9 122 aaPredicted RBP13.59□□□□□ -0.23
PGAP3-201ENST00000300658 TAF15Q92804 592 aaKnown RBP eCLIP13.59□□□□□ -0.23
PGAP3-201ENST00000300658 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 A0A1W2PPQ1 181 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 SHISA9B4DS77 424 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 CDKN1BP46527 198 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 RAB7AP51149 207 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 RND2P52198 227 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 OR1L6Q8NGR2 347 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 KIAA1456Q9P272 454 aa13.59□□□□□ -0.23
PGAP3-201ENST00000300658 TPRP12270 2363 aaKnown RBP13.59□□□□□ -0.23
PGAP3-201ENST00000300658 CEBPZOSA8MTT3 80 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 E7EQL1 145 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 IGKV1D-33P01593 117 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 IGKV1-33P01594 117 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 TLE1Q04724 770 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 PRAMEF5Q5TYX0 476 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 TMEM18Q96B42 140 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 LAMP3Q9UQV4 416 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 TNCP24821 2201 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 TRGV8A0A0C4DH27 118 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 FGF8P55075 233 aaPredicted RBP13.58□□□□□ -0.24
PGAP3-201ENST00000300658 LCN15Q6UWW0 184 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 CLDND2Q8NHS1 167 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 TBX15Q96SF7 602 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 SMDT1Q9H4I9 107 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 NAGKQ9UJ70 344 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 ZFP30Q9Y2G7 519 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 NCOR2Q9Y618 2525 aa13.58□□□□□ -0.24
PGAP3-201ENST00000300658 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 CHRNB4P30926 498 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 RAB11AP62491 216 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 LEMD1Q68G75 181 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 HIPK2Q9H2X6 1198 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 C15orf62A8K5M9 175 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 LYG1Q8N1E2 194 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 CCL17Q92583 94 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 S1PR3Q99500 378 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 PSMG3Q9BT73 122 aaPredicted RBP13.57□□□□□ -0.24
PGAP3-201ENST00000300658 IDI2-AS1Q9NZ38 188 aa13.57□□□□□ -0.24
PGAP3-201ENST00000300658 A0A1B0GUS0 222 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 TNFRSF1AP19438 455 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
PGAP3-201ENST00000300658 PTTG1IPP53801 180 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 GBGT1Q8N5D6 347 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 VKORC1Q9BQB6 163 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 SAP30LQ9HAJ7 183 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 TACC2O95359 2948 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 C20orf202A1L168 122 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 CBY3A6NI87 242 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 TMEM238C9JI98 176 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 PLAUP00749 431 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 RELBQ01201 579 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 TFF3Q07654 80 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 COA6Q5JTJ3 125 aaKnown RBP13.56□□□□□ -0.24
PGAP3-201ENST00000300658 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 Q6ZVH6 145 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
PGAP3-201ENST00000300658 RNASE6Q93091 150 aaKnown RBP13.56□□□□□ -0.24
PGAP3-201ENST00000300658 SRD5A3Q9H8P0 318 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 LINC00574Q9H8X3 128 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
PGAP3-201ENST00000300658 TMEM178BH3BS89 294 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 TMPRSS3P57727 454 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 DPPA3Q6W0C5 159 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 ZCCHC14Q8WYQ9 949 aaKnown RBP13.55□□□□□ -0.24
PGAP3-201ENST00000300658 CORO2AQ92828 525 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 RBFOX2O43251 390 aaKnown RBP eCLIP13.55□□□□□ -0.24
PGAP3-201ENST00000300658 CCL3L1P16619 93 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 OR10P1Q8NGE3 313 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 LINC01560Q8TB33 94 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 TMEM140Q9NV12 185 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 FUT9Q9Y231 359 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 TRAV1-1A0A0B4J248 108 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 HSPB1P04792 205 aaKnown RBP13.55□□□□□ -0.24
PGAP3-201ENST00000300658 MYOD1P15172 320 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 SERF2P84101 59 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 CDSNQ15517 529 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 ZNF506Q5JVG8 444 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 S100A7AQ86SG5 101 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 MBD3L1Q8WWY6 194 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 WFDC12Q8WWY7 111 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 GNG13Q9P2W3 67 aa13.55□□□□□ -0.24
PGAP3-201ENST00000300658 SLC25A10Q9UBX3 287 aaPredicted RBP13.55□□□□□ -0.24
PGAP3-201ENST00000300658 RPUSD1Q9UJJ7 312 aaKnown RBP13.55□□□□□ -0.24
PGAP3-201ENST00000300658 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
PGAP3-201ENST00000300658 RBPJQ06330 500 aa13.54□□□□□ -0.24
PGAP3-201ENST00000300658 NUDT10Q8NFP7 164 aa13.54□□□□□ -0.24
PGAP3-201ENST00000300658 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
PGAP3-201ENST00000300658 NKX6-3A6NJ46 265 aa13.54□□□□□ -0.24
PGAP3-201ENST00000300658 TNFRSF13BO14836 293 aaPredicted RBP13.54□□□□□ -0.24
PGAP3-201ENST00000300658 HMGB3O15347 200 aaKnown RBP13.54□□□□□ -0.24
PGAP3-201ENST00000300658 DEFA4P12838 97 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms