RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 EIF3AQ14152 1382 aaKnown RBP2.21□□□□□ -2.06
TRAPPC13-208ENST00000505553 CCNB3Q8WWL7 1395 aa2.21□□□□□ -2.06
TRAPPC13-208ENST00000505553 EFCAB6Q5THR3 1501 aa2.21□□□□□ -2.06
TRAPPC13-208ENST00000505553 CCDC18Q5T9S5 1454 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 ARHGAP35Q9NRY4 1499 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 CCDC144AA2RUR9 1427 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 A0A1B0GU33 70 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 KNCNA6PVL3 124 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 C9JCJ5 164 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 INMT-MINDY4F8WBC2 141 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 NDUFB2O95178 105 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 GNA12Q03113 381 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 TAF1AQ15573 450 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 HACD4Q5VWC8 232 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 GLT8D1Q68CQ7 371 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 TMEM42Q69YG0 159 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 Q8NAQ8 132 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 OR10X1Q8NGY0 326 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 MUC7Q8TAX7 377 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 GPR119Q8TDV5 335 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 PPP1R2P1Q96PQ5 205 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 TMEM222Q9H0R3 208 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 PRTFDC1Q9NRG1 225 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 MRPL27Q9P0M9 148 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 MARCOQ9UEW3 520 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF391Q9UJN7 358 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 SPHKAPQ2M3C7 1700 aa2.2□□□□□ -2.06
TRAPPC13-208ENST00000505553 TP53I11O14683 189 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF189O75820 626 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 OR7C1O76099 320 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF14P17017 642 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 CRHBPP24387 322 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 CRYBB3P26998 211 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 LPAR6P43657 344 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 RPL27AP46776 148 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 SNRPD2P62316 118 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 IL15RAQ13261 267 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 CST6Q15828 149 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF141Q15928 474 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 LY6EQ16553 131 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 IAH1Q2TAA2 248 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 IGFL1Q6UW32 110 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 TMED4Q7Z7H5 227 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 GPHB5Q86YW7 130 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF664Q8N3J9 261 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 DAND5Q8N907 189 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 OR10P1Q8NGE3 313 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 OR2T4Q8NH00 348 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 MCFD2Q8NI22 146 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 KLF6Q99612 283 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 SELENOSQ9BQE4 189 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 COMMD5Q9GZQ3 224 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 VCX3BQ9H321 246 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 PRO0461Q9UI25 63 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 RGPD1P0DJD0 1748 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 FYCO1Q9BQS8 1478 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 ATAD5Q96QE3 1844 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF532Q9HCE3 1301 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 DISP2A7MBM2 1401 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 PIK3C2GO75747 1445 aa2.19□□□□□ -2.06
TRAPPC13-208ENST00000505553 DLC1Q96QB1 1528 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 PIK3C2BO00750 1634 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 OR4C46A6NHA9 309 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 C17orf51A8MQB3 221 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 ZNF878C9JN71 531 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 LST1O00453 97 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 UBFD1O14562 309 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 PDE6DO43924 150 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 LY6HO94772 140 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 CPSF4O95639 269 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 HLA-DRB1P01911 266 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 RPL5P46777 297 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 GABRA2P47869 451 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 POLR2GP62487 172 aaKnown RBP eCLIP2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 PSG4Q00888 419 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 GRK1Q15835 563 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 KRTAP13-2Q52LG2 175 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 TNFAIP8L3Q5GJ75 292 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 PRR9Q5T870 116 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 NOXRED1Q6NXP6 359 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 DHRS4L2Q6PKH6 230 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 SMARCD3Q6STE5 483 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 S100A7AQ86SG5 101 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 OOSP2Q86WS3 158 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 OR4X1Q8NH49 305 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 SGMS2Q8NHU3 365 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 RAD51AP1Q96B01 352 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 PRRT1Q99946 306 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 HIGD2AQ9BW72 106 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 CMTM6Q9NX76 183 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 IDI2-AS1Q9NZ38 188 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 PRELID1Q9Y255 219 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 R4GN34 69 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 CDC42BPAQ5VT25 1732 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 NID2Q14112 1375 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 MTUS2Q5JR59 1369 aa2.18□□□□□ -2.06
TRAPPC13-208ENST00000505553 CCDC141Q6ZP82 1450 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms