RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 DMBX1Q8NFW5 382 aa12.26□□□□□ -0.45
ERCC3-206ENST00000462306 COA4Q9NYJ1 87 aa12.26□□□□□ -0.45
ERCC3-206ENST00000462306 NDUFA13Q9P0J0 144 aa12.26□□□□□ -0.45
ERCC3-206ENST00000462306 RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
ERCC3-206ENST00000462306 DUS4LO95620 317 aaKnown RBP12.25□□□□□ -0.45
ERCC3-206ENST00000462306 KRASP01116 189 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 FGF2P09038 288 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 PTBP1P26599 531 aaKnown RBP eCLIP12.25□□□□□ -0.45
ERCC3-206ENST00000462306 PIGPP57054 158 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 ZNF616Q08AN1 781 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 ZNF79Q15937 498 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 OR13C8Q8NGS7 320 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 ZFAND1Q8TCF1 268 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
ERCC3-206ENST00000462306 FYTTD1Q96QD9 318 aaKnown RBP12.25□□□□□ -0.45
ERCC3-206ENST00000462306 THAP7Q9BT49 309 aaPredicted RBP12.25□□□□□ -0.45
ERCC3-206ENST00000462306 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 OR8U8P0C7N1 319 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 G6PCP35575 357 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 ETV6P41212 452 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 RAB25P57735 213 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 OR2B8PP59922 312 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 ERVK-16P61578 105 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 DEFA5Q01523 94 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 ZNF45Q02386 682 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 PYDC2Q56P42 97 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 OR6Q1Q8NGQ2 317 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 TRIM63Q969Q1 353 aa12.24□□□□□ -0.45
ERCC3-206ENST00000462306 IGHV4OR15-8A0A075B7B6 117 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 A0A087WW49 117 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 A0A0G2JLM5 398 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 C13orf42A0A1B0GVH6 325 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 NPIPB5A8MRT5 1133 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 PRH1P02810 166 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 CTSDP07339 412 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-206ENST00000462306 AREGP15514 252 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-206ENST00000462306 C19orf35Q6ZS72 473 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 SLC25A42Q86VD7 318 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 DPF1Q92782 380 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 SEC22AQ96IW7 307 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 TP53RKQ96S44 253 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 MCRIP2Q9BUT9 160 aaKnown RBP12.23□□□□□ -0.45
ERCC3-206ENST00000462306 SLC2A8Q9NY64 477 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 ZNF257Q9Y2Q1 563 aa12.23□□□□□ -0.45
ERCC3-206ENST00000462306 LINC01619G3V211 115 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 H0Y980 276 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 WIPF1O43516 503 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 PRB2P02812 416 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-206ENST00000462306 HSPB1P04792 205 aaKnown RBP12.22□□□□□ -0.45
ERCC3-206ENST00000462306 CRYGCP07315 174 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 ECI1P42126 302 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 KLF9Q13886 244 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-206ENST00000462306 Q8N402 240 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 PRRT1Q99946 306 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-206ENST00000462306 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 GPR132Q9UNW8 380 aa12.22□□□□□ -0.45
ERCC3-206ENST00000462306 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 TEX50A0A1B0GTY4 177 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 IGLC7A0M8Q6 106 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 SERPINE2P07093 398 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 CTRB1P17538 263 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 PSMB6P28072 239 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 SLURP1P55000 103 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 RHOGP84095 191 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 ZNF343Q6P1L6 599 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 DCUN1D4Q92564 292 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-206ENST00000462306 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.45
ERCC3-206ENST00000462306 GPR61Q9BZJ8 451 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 NSG2Q9Y328 171 aa12.21□□□□□ -0.45
ERCC3-206ENST00000462306 DNAH3Q8TD57 4116 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 FAM223BA6NKX1 122 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-206ENST00000462306 KRTAP10-11P60412 298 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 EGFEM1PQ0D2K5 195 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 SP6Q3SY56 376 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-206ENST00000462306 SPANXN2Q5MJ10 180 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 FAM223AQ8IWN6 122 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 NECAP1Q8NC96 275 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 SRSF8Q9BRL6 282 aaKnown RBP12.2□□□□□ -0.46
ERCC3-206ENST00000462306 SRRQ9GZT4 340 aa12.2□□□□□ -0.46
ERCC3-206ENST00000462306 RANGRFQ9HD47 186 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-206ENST00000462306 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms