RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM230Q96A57 120 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 GALNT14Q96FL9 552 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 GON7Q9BXV9 100 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 C20orf85Q9H1P6 137 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 SERTAD4Q9NUC0 356 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM140Q9NV12 185 aa12.83□□□□□ -0.36
CCDC84-201ENST00000334418 ARPC1BO15143 372 aaKnown RBP12.82□□□□□ -0.36
CCDC84-201ENST00000334418 KRASP01116 189 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 VDAC1P21796 283 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 SLC35B1P78383 322 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 TNXAQ16473 311 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 PRSS8Q16651 343 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 SP6Q3SY56 376 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 ZNF562Q6V9R5 426 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
CCDC84-201ENST00000334418 KLHDC1Q8N7A1 406 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM167AQ8TBQ9 72 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 CHPT1Q8WUD6 406 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM222Q9H0R3 208 aa12.82□□□□□ -0.36
CCDC84-201ENST00000334418 ATP6V0E1O15342 81 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 TCRBP04435 133 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 VAMP1P23763 118 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 MAS1LP35410 378 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 G6PCP35575 357 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 PROK1P58294 105 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 CX3CL1P78423 397 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 IFITM3Q01628 133 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 FXYD3Q14802 87 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 ZNF695Q8IW36 515 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 STPG2Q8N412 459 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 ZNF430Q9H8G1 570 aaPredicted RBP12.81□□□□□ -0.36
CCDC84-201ENST00000334418 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
CCDC84-201ENST00000334418 FCN1O00602 326 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 SNAPC5O75971 98 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 IGF1P05019 195 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 RPL8P62917 257 aaKnown RBP12.8□□□□□ -0.36
CCDC84-201ENST00000334418 NDPQ00604 133 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM267Q0VDI3 215 aaPredicted RBP12.8□□□□□ -0.36
CCDC84-201ENST00000334418 H2BFWTQ7Z2G1 175 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 CADM3Q8N126 398 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 GRPEL2Q8TAA5 225 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 RBPMSQ93062 196 aaKnown RBP12.8□□□□□ -0.36
CCDC84-201ENST00000334418 IL22RA2Q969J5 263 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
CCDC84-201ENST00000334418 NUDT15Q9NV35 164 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 FLVCR2Q9UPI3 526 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 NUBP2Q9Y5Y2 271 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 PLXNB1O43157 2135 aa12.8□□□□□ -0.36
CCDC84-201ENST00000334418 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 UPK2O00526 184 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 CDS2O95674 445 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
CCDC84-201ENST00000334418 FGF2P09038 288 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM187Q14656 261 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 ECSCRQ19T08 205 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 C4orf46Q504U0 113 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 CENPVQ7Z7K6 275 aaPredicted RBP12.79□□□□□ -0.36
CCDC84-201ENST00000334418 LGI3Q8N145 548 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 C3orf56Q8N813 242 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 SGMS2Q8NHU3 365 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 GLYATL2Q8WU03 294 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
CCDC84-201ENST00000334418 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 NOL4LQ96MY1 436 aaPredicted RBP12.79□□□□□ -0.36
CCDC84-201ENST00000334418 PHB2Q99623 299 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 WNT10AQ9GZT5 417 aa12.79□□□□□ -0.36
CCDC84-201ENST00000334418 TNCP24821 2201 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 TRAV6A0A075B6T7 132 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 TRAV41A0A0B4J266 112 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 LINC01548A6NM66 108 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 RBMXL2O75526 392 aaKnown RBP12.78□□□□□ -0.36
CCDC84-201ENST00000334418 SFT2D2O95562 160 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 IGKV1-39P01597 117 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 IGKV1D-39P04432 117 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 HLA-GP17693 338 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 RAB25P57735 213 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 SUPT4H1P63272 117 aaKnown RBP12.78□□□□□ -0.36
CCDC84-201ENST00000334418 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 OR4X2Q8NGF9 303 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 CASTOR1Q8WTX7 329 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM56Q96MV1 263 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 SPIN2AQ99865 258 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 SPIN2BQ9BPZ2 258 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 COMMD5Q9GZQ3 224 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 FKBP11Q9NYL4 201 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 PRNDQ9UKY0 176 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
CCDC84-201ENST00000334418 H2AFB2P0C5Z0 115 aa12.77□□□□□ -0.37
CCDC84-201ENST00000334418 OR4E1P0C645 316 aa12.77□□□□□ -0.37
CCDC84-201ENST00000334418 ANXA7P20073 488 aaKnown RBP12.77□□□□□ -0.37
CCDC84-201ENST00000334418 RPL27AP46776 148 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms