RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
CCDC84-201ENST00000334418 CCDC180Q9P1Z9 1646 aa34.29■■■■□ 3.08
CCDC84-201ENST00000334418 ABCC9O60706 1549 aa33.45■■■□□ 2.95
CCDC84-201ENST00000334418 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
CCDC84-201ENST00000334418 NACADO15069 1562 aa32.11■■■□□ 2.73
CCDC84-201ENST00000334418 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
CCDC84-201ENST00000334418 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
CCDC84-201ENST00000334418 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
CCDC84-201ENST00000334418 DCAF1Q9Y4B6 1507 aa32.03■■■□□ 2.72
CCDC84-201ENST00000334418 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
CCDC84-201ENST00000334418 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
CCDC84-201ENST00000334418 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
CCDC84-201ENST00000334418 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
CCDC84-201ENST00000334418 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
CCDC84-201ENST00000334418 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
CCDC84-201ENST00000334418 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.42
CCDC84-201ENST00000334418 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
CCDC84-201ENST00000334418 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
CCDC84-201ENST00000334418 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
CCDC84-201ENST00000334418 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
CCDC84-201ENST00000334418 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
CCDC84-201ENST00000334418 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
CCDC84-201ENST00000334418 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.33
CCDC84-201ENST00000334418 ATAD2BQ9ULI0 1458 aa29.63■■■□□ 2.33
CCDC84-201ENST00000334418 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
CCDC84-201ENST00000334418 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
CCDC84-201ENST00000334418 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
CCDC84-201ENST00000334418 WIZO95785 1651 aa29.49■■■□□ 2.31
CCDC84-201ENST00000334418 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
CCDC84-201ENST00000334418 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
CCDC84-201ENST00000334418 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
CCDC84-201ENST00000334418 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
CCDC84-201ENST00000334418 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
CCDC84-201ENST00000334418 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
CCDC84-201ENST00000334418 NESP48681 1621 aa28.82■■■□□ 2.2
CCDC84-201ENST00000334418 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
CCDC84-201ENST00000334418 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
CCDC84-201ENST00000334418 CFTRP13569 1480 aa28.64■■■□□ 2.17
CCDC84-201ENST00000334418 CUX2O14529 1486 aa28.59■■■□□ 2.17
CCDC84-201ENST00000334418 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
CCDC84-201ENST00000334418 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
CCDC84-201ENST00000334418 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
CCDC84-201ENST00000334418 KIF21AQ7Z4S6 1674 aa28.47■■■□□ 2.15
CCDC84-201ENST00000334418 FANCD2Q9BXW9 1451 aa28.42■■■□□ 2.14
CCDC84-201ENST00000334418 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
CCDC84-201ENST00000334418 THOC2Q8NI27 1593 aaKnown RBP28.33■■■□□ 2.13
CCDC84-201ENST00000334418 MRC2Q9UBG0 1479 aa28.25■■■□□ 2.11
CCDC84-201ENST00000334418 WDR62O43379 1518 aa28.15■■■□□ 2.1
CCDC84-201ENST00000334418 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
CCDC84-201ENST00000334418 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
CCDC84-201ENST00000334418 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
CCDC84-201ENST00000334418 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
CCDC84-201ENST00000334418 CUX1P39880 1505 aa27.92■■■□□ 2.06
CCDC84-201ENST00000334418 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
CCDC84-201ENST00000334418 BIVM-ERCC5R4GMW8 1640 aa27.84■■■□□ 2.05
CCDC84-201ENST00000334418 TOP2BQ02880 1626 aa27.82■■■□□ 2.04
CCDC84-201ENST00000334418 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
CCDC84-201ENST00000334418 POLA1P09884 1462 aaPredicted RBP27.79■■■□□ 2.04
CCDC84-201ENST00000334418 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
CCDC84-201ENST00000334418 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
CCDC84-201ENST00000334418 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
CCDC84-201ENST00000334418 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
CCDC84-201ENST00000334418 SOGA1O94964 1423 aa27.67■■■□□ 2.02
CCDC84-201ENST00000334418 RAD54L2Q9Y4B4 1467 aa27.63■■■□□ 2.01
CCDC84-201ENST00000334418 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
CCDC84-201ENST00000334418 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
CCDC84-201ENST00000334418 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
CCDC84-201ENST00000334418 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
CCDC84-201ENST00000334418 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
CCDC84-201ENST00000334418 TDRD9Q8NDG6 1382 aaKnown RBP27.43■■□□□ 1.98
CCDC84-201ENST00000334418 ABCA5Q8WWZ7 1642 aa27.42■■□□□ 1.98
CCDC84-201ENST00000334418 AQRO60306 1485 aaKnown RBP eCLIP27.42■■□□□ 1.984e-7■■■■■ 35.5
CCDC84-201ENST00000334418 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
CCDC84-201ENST00000334418 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
CCDC84-201ENST00000334418 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
CCDC84-201ENST00000334418 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
CCDC84-201ENST00000334418 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
CCDC84-201ENST00000334418 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
CCDC84-201ENST00000334418 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
CCDC84-201ENST00000334418 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
CCDC84-201ENST00000334418 FBLN2P98095 1184 aa27.24■■□□□ 1.95
CCDC84-201ENST00000334418 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
CCDC84-201ENST00000334418 CUL7Q14999 1698 aa27.12■■□□□ 1.93
CCDC84-201ENST00000334418 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
CCDC84-201ENST00000334418 CHD1O14646 1710 aa27.11■■□□□ 1.93
CCDC84-201ENST00000334418 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
CCDC84-201ENST00000334418 EEA1Q15075 1411 aa27.07■■□□□ 1.92
CCDC84-201ENST00000334418 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
CCDC84-201ENST00000334418 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
CCDC84-201ENST00000334418 IGF1RP08069 1367 aa27.06■■□□□ 1.92
CCDC84-201ENST00000334418 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
CCDC84-201ENST00000334418 CARMIL1Q5VZK9 1371 aa26.96■■□□□ 1.91
CCDC84-201ENST00000334418 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
CCDC84-201ENST00000334418 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
CCDC84-201ENST00000334418 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
CCDC84-201ENST00000334418 ARHGEF11O15085 1522 aa26.93■■□□□ 1.9
CCDC84-201ENST00000334418 CSRNP3Q8WYN3 585 aa26.88■■□□□ 1.89
CCDC84-201ENST00000334418 RAPGEF2Q9Y4G8 1499 aa26.87■■□□□ 1.89
CCDC84-201ENST00000334418 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
CCDC84-201ENST00000334418 CYB5RLQ6IPT4 315 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms