RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SIGLECL1Q8N7X8 197 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 OR1L6Q8NGR2 347 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 GNB1LQ9BYB4 327 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 SLC45A2Q9UMX9 530 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 MRPS17Q9Y2R5 130 aaKnown RBP14.71□□□□□ -0.06
RAB40C-205ENST00000539661 AHCTF1Q8WYP5 2266 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 SCO2A0A1W2PP80 73 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 PATE3B3GLJ2 98 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 RAB7AP51149 207 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 EDDM3BP56851 147 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 RPS16P62249 146 aaKnown RBP14.7□□□□□ -0.06
RAB40C-205ENST00000539661 TGFBR3Q03167 851 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 DMRTA1Q5VZB9 504 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 SAA2-SAA4A0A096LPE2 208 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 TMEM30CPA0ZSE6 113 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 FCN1O00602 326 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 RBMXL2O75526 392 aaKnown RBP14.7□□□□□ -0.06
RAB40C-205ENST00000539661 PCP4P48539 62 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 IGFBP7Q16270 282 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 BATFQ16520 125 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 AARDQ4LEZ3 155 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 SLC35E1Q96K37 410 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 MSL2Q9HCI7 577 aa14.7□□□□□ -0.06
RAB40C-205ENST00000539661 GPX1P07203 203 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 BMP5P22003 454 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 CTRLP40313 264 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 FOLR3P41439 243 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 RPEL1Q2QD12 228 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 ZNF718Q3SXZ3 478 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 COX19Q49B96 90 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 ANKRD39Q53RE8 183 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 C11orf52Q96A22 123 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 DOCK11Q5JSL3 2073 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 SIAH2O43255 324 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 MT-ND6P03923 174 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 LPAL2Q16609 132 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 C1orf174Q8IYL3 243 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 ZNF808Q8N4W9 903 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-205ENST00000539661 MAFAQ8NHW3 353 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-205ENST00000539661 LRFN3Q9BTN0 628 aa14.69□□□□□ -0.06
RAB40C-205ENST00000539661 IGHEP01854 428 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 FOXG1P55316 489 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-205ENST00000539661 DCAF12Q5T6F0 453 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 FBXW9Q5XUX1 488 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 LRP11Q86VZ4 500 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 TUSC5Q8IXB3 177 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 SCCPDHQ8NBX0 429 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 FBXL7Q9UJT9 491 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 OOEPA6NGQ2 149 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 FAM90A9PA6NNJ1 464 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 SPINK2P20155 84 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 TMPRSS3P57727 454 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 PDLIM3Q53GG5 364 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-205ENST00000539661 KRTCAP3Q53RY4 240 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 OR10J3Q5JRS4 329 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 WDR73Q6P4I2 378 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 Q8N976 141 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 NINJ1Q92982 152 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 SFXN3Q9BWM7 321 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 DEPPQ9NTK1 212 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 UQCR10Q9UDW1 63 aa14.68□□□□□ -0.06
RAB40C-205ENST00000539661 TRGV10A0A0A0MS01 117 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 SNURFLB1AK76 121 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 C12orf77C9JDV5 145 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 DIRC3C9JPN6 131 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 CDIPTO14735 213 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 NXPH2O95156 264 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 CHRNB4P30926 498 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 CXCL12P48061 93 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 THBS3P49746 956 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 SUMO1P63165 101 aaKnown RBP14.67□□□□□ -0.06
RAB40C-205ENST00000539661 SPATA46Q5T0L3 261 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 WDR86Q86TI4 376 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 C11orf42Q8N5U0 333 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 HSD17B10Q99714 261 aaKnown RBP14.67□□□□□ -0.06
RAB40C-205ENST00000539661 ESPL1Q14674 2120 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 K7EN84 100 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 MT-CO2P00403 227 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 REG1AP05451 166 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 IER3P46695 156 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 SLC35E4Q6ICL7 350 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 TREML4Q6UXN2 200 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 APH1AQ96BI3 265 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 KNTC1P50748 2209 aa14.67□□□□□ -0.06
RAB40C-205ENST00000539661 RPL31P62899 125 aaKnown RBP14.66□□□□□ -0.06
RAB40C-205ENST00000539661 HLA-DRB5Q30154 266 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 MCEMP1Q8IX19 187 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 MMD2Q8IY49 270 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 SPEM1Q8N4L4 309 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 DNAJC4Q9NNZ3 241 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 SIT1Q9Y3P8 196 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 DCHS1Q96JQ0 3298 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 PSG7Q13046 419 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 SPINK9Q5DT21 86 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 OR2M7Q8NG81 312 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 OR52L2PQ8NGH6 319 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 SAP25Q8TEE9 199 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 UHRF2Q96PU4 802 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 GGTLC1Q9BX51 225 aa14.66□□□□□ -0.06
RAB40C-205ENST00000539661 ASCL3Q9NQ33 180 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms