RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W PRP28P23394 588 aa1.23□□□□□ -2.21
SEC8YPR055W YMC1P32331 307 aa1.23□□□□□ -2.21
SEC8YPR055W EUG1P32474 517 aa1.23□□□□□ -2.21
SEC8YPR055W TFC4P33339 1025 aa1.23□□□□□ -2.21
SEC8YPR055W CUE2P36075 443 aaKnown RBP1.23□□□□□ -2.21
SEC8YPR055W YMC2P38087 329 aa1.23□□□□□ -2.21
SEC8YPR055W UBP12P39538 1254 aa1.23□□□□□ -2.21
SEC8YPR055W IES1P43579 692 aa1.23□□□□□ -2.21
SEC8YPR055W MNN11P46985 422 aaKnown RBP1.23□□□□□ -2.21
SEC8YPR055W PTA1Q01329 785 aaPredicted RBP1.23□□□□□ -2.21
SEC8YPR055W THI7Q05998 598 aa1.23□□□□□ -2.21
SEC8YPR055W NGL1Q08213 363 aaKnown RBP1.23□□□□□ -2.21
SEC8YPR055W HFI1Q12060 488 aa1.23□□□□□ -2.21
SEC8YPR055W YPR027CQ12079 277 aa1.23□□□□□ -2.21
SEC8YPR055W PCK1P10963 549 aa1.23□□□□□ -2.21
SEC8YPR055W ABF1P14164 731 aa1.23□□□□□ -2.21
SEC8YPR055W GRX4P32642 244 aa1.23□□□□□ -2.21
SEC8YPR055W APL3P38065 1025 aa1.23□□□□□ -2.21
SEC8YPR055W YEL020CP39994 560 aa1.23□□□□□ -2.21
SEC8YPR055W PRM2P40534 656 aa1.23□□□□□ -2.21
SEC8YPR055W MFM1Q02783 413 aa1.23□□□□□ -2.21
SEC8YPR055W YDR179W-AQ03983 463 aa1.23□□□□□ -2.21
SEC8YPR055W YSH1Q06224 779 aaPredicted RBP1.23□□□□□ -2.21
SEC8YPR055W ARO10Q06408 635 aa1.23□□□□□ -2.21
SEC8YPR055W IZH3Q07959 543 aa1.23□□□□□ -2.21
SEC8YPR055W TUB1P09733 447 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W ERG11P10614 530 aa1.22□□□□□ -2.21
SEC8YPR055W STE4P18851 423 aa1.22□□□□□ -2.21
SEC8YPR055W NUP1P20676 1076 aa1.22□□□□□ -2.21
SEC8YPR055W KCC4P25389 1037 aa1.22□□□□□ -2.21
SEC8YPR055W MTC7P32633 139 aa1.22□□□□□ -2.21
SEC8YPR055W RMA1P36001 430 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W MRPL7P36519 292 aa1.22□□□□□ -2.21
SEC8YPR055W ENP1P38333 483 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W STB5P38699 743 aa1.22□□□□□ -2.21
SEC8YPR055W YIL166CP40445 542 aa1.22□□□□□ -2.21
SEC8YPR055W YDL183CP48569 320 aa1.22□□□□□ -2.21
SEC8YPR055W YIP4P53093 235 aa1.22□□□□□ -2.21
SEC8YPR055W YGR054WP53235 642 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W YCG1Q06680 1035 aa1.22□□□□□ -2.21
SEC8YPR055W MUP3P38734 546 aa1.22□□□□□ -2.21
SEC8YPR055W GPP2P40106 250 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W TAX4P47030 604 aa1.22□□□□□ -2.21
SEC8YPR055W FOL1P53848 824 aa1.22□□□□□ -2.21
SEC8YPR055W UFO1Q04511 668 aa1.22□□□□□ -2.21
SEC8YPR055W CWC2Q12046 339 aaPredicted RBP1.22□□□□□ -2.21
SEC8YPR055W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
SEC8YPR055W RMP1Q12530 201 aa1.22□□□□□ -2.21
SEC8YPR055W AAD3P25612 363 aa1.22□□□□□ -2.21
SEC8YPR055W DGR2P32330 852 aa1.22□□□□□ -2.21
SEC8YPR055W NTH1P32356 751 aa1.22□□□□□ -2.21
SEC8YPR055W DID4P36108 232 aa1.22□□□□□ -2.21
SEC8YPR055W PEA2P40091 420 aa1.22□□□□□ -2.21
SEC8YPR055W RNR4P49723 345 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W SQS1P53866 767 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W APM1Q00776 475 aaPredicted RBP1.22□□□□□ -2.21
SEC8YPR055W EFR3Q03653 782 aaKnown RBP1.22□□□□□ -2.21
SEC8YPR055W HOF1Q05080 669 aa1.22□□□□□ -2.21
SEC8YPR055W YEL076C-AP0CX16 216 aa1.21□□□□□ -2.22
SEC8YPR055W YLR464WP0CX17 216 aa1.21□□□□□ -2.22
SEC8YPR055W HMG2P12684 1045 aa1.21□□□□□ -2.22
SEC8YPR055W COX11P19516 300 aaKnown RBP1.21□□□□□ -2.22
SEC8YPR055W MF(ALPHA)2P32435 120 aa1.21□□□□□ -2.22
SEC8YPR055W YEL076CP39971 216 aa1.21□□□□□ -2.22
SEC8YPR055W SPC105P53148 917 aa1.21□□□□□ -2.22
SEC8YPR055W SPO1P53541 631 aa1.21□□□□□ -2.22
SEC8YPR055W BUD17P53727 317 aa1.21□□□□□ -2.22
SEC8YPR055W OSW1Q08692 278 aa1.21□□□□□ -2.22
SEC8YPR055W PRP22P24384 1145 aaKnown RBP1.21□□□□□ -2.22
SEC8YPR055W YPT53P36019 220 aa1.21□□□□□ -2.22
SEC8YPR055W PIP2P52960 996 aa1.21□□□□□ -2.22
SEC8YPR055W IMO32P53219 342 aa1.21□□□□□ -2.22
SEC8YPR055W MDR1P53258 950 aa1.21□□□□□ -2.22
SEC8YPR055W YOR378WQ08902 515 aa1.21□□□□□ -2.22
SEC8YPR055W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SEC8YPR055W CLF1Q12309 687 aaPredicted RBP1.21□□□□□ -2.22
SEC8YPR055W TPK2P06245 380 aa1.2□□□□□ -2.22
SEC8YPR055W ADE5,7P07244 802 aaKnown RBP1.2□□□□□ -2.22
SEC8YPR055W HOM2P13663 365 aaKnown RBP1.2□□□□□ -2.22
SEC8YPR055W SAT4P25333 603 aaKnown RBP1.2□□□□□ -2.22
SEC8YPR055W YBR071WP38243 211 aa1.2□□□□□ -2.22
SEC8YPR055W RIM4P38741 713 aa1.2□□□□□ -2.22
SEC8YPR055W COG6P53959 839 aa1.2□□□□□ -2.22
SEC8YPR055W PPN1Q04119 674 aa1.2□□□□□ -2.22
SEC8YPR055W MRI1Q06489 411 aaKnown RBP1.2□□□□□ -2.22
SEC8YPR055W TRE2Q08693 809 aa1.2□□□□□ -2.22
SEC8YPR055W ULA1Q12059 462 aa1.2□□□□□ -2.22
SEC8YPR055W RTK1Q12100 620 aaPredicted RBP1.2□□□□□ -2.22
SEC8YPR055W AEP2P22136 580 aa1.2□□□□□ -2.22
SEC8YPR055W ARG1P22768 420 aa1.2□□□□□ -2.22
SEC8YPR055W PLC1P32383 869 aa1.2□□□□□ -2.22
SEC8YPR055W YEL025CP39991 1188 aa1.2□□□□□ -2.22
SEC8YPR055W NIT2P47016 307 aa1.2□□□□□ -2.22
SEC8YPR055W FDC1Q03034 503 aa1.2□□□□□ -2.22
SEC8YPR055W NGL2Q03264 515 aaKnown RBP1.2□□□□□ -2.22
SEC8YPR055W SKY1Q03656 742 aa1.2□□□□□ -2.22
SEC8YPR055W ARG7Q04728 441 aa1.2□□□□□ -2.22
SEC8YPR055W YPL216WQ08964 1102 aa1.2□□□□□ -2.22
SEC8YPR055W AIM41Q12032 185 aa1.2□□□□□ -2.22
SEC8YPR055W YPK1P12688 680 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms