RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeast

Gene NIP7, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP7	YPL211W	CDC43	P18898	376 aa		4.21	□□□□□ -1.74
NIP7	YPL211W	MNN1	P39106	762 aa		4.21	□□□□□ -1.74
NIP7	YPL211W	SMX3	P54999	86 aa	Predicted RBP	4.21	□□□□□ -1.74
NIP7	YPL211W	HMO1	Q03973	246 aa	Known RBP	4.21	□□□□□ -1.74
NIP7	YPL211W	COG8	Q04632	607 aa		4.21	□□□□□ -1.74
NIP7	YPL211W	MLH3	Q12083	715 aa		4.21	□□□□□ -1.74
NIP7	YPL211W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
NIP7	YPL211W	NOP14	Q99207	810 aa	Known RBP	4.21	□□□□□ -1.74
NIP7	YPL211W	ROM2	P51862	1356 aa	Known RBP	4.21	□□□□□ -1.74
NIP7	YPL211W	SNF2	P22082	1703 aa		4.21	□□□□□ -1.74
NIP7	YPL211W	SPT7	P35177	1332 aa		4.21	□□□□□ -1.74
NIP7	YPL211W	RPO41	P13433	1351 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	SFP1	P32432	683 aa		4.2	□□□□□ -1.74
NIP7	YPL211W	APN2	P38207	520 aa		4.2	□□□□□ -1.74
NIP7	YPL211W	ENP1	P38333	483 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	SSZ1	P38788	538 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	GID8	P40208	455 aa		4.2	□□□□□ -1.74
NIP7	YPL211W	SET2	P46995	733 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	NOP9	P47077	666 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	VPS73	P53142	486 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	YAP1802	P53309	568 aa		4.2	□□□□□ -1.74
NIP7	YPL211W	SDA1	P53313	767 aa	Known RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	ISA1	Q07821	250 aa	Predicted RBP	4.2	□□□□□ -1.74
NIP7	YPL211W	DCS2	Q12123	353 aa		4.2	□□□□□ -1.74
NIP7	YPL211W	ZRT2	Q12436	422 aa		4.2	□□□□□ -1.74
NIP7	YPL211W	SIR4	P11978	1358 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	CRP1	P38845	465 aa	Known RBP	4.19	□□□□□ -1.74
NIP7	YPL211W	YHR202W	P38887	602 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	YJL206C	P39529	758 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	NDC80	P40460	691 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	CCT7	P42943	550 aa	Known RBP	4.19	□□□□□ -1.74
NIP7	YPL211W	FHN1	P53279	174 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	DNM1	P54861	757 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	USV1	Q12132	391 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	ADR1	P07248	1323 aa		4.19	□□□□□ -1.74
NIP7	YPL211W	GFA1	P14742	717 aa	Known RBP	4.18	□□□□□ -1.74
NIP7	YPL211W	PEX1	P24004	1043 aa		4.18	□□□□□ -1.74
NIP7	YPL211W	YKL133C	P36066	463 aa		4.18	□□□□□ -1.74
NIP7	YPL211W	AKL1	P38080	1108 aa	Known RBP	4.18	□□□□□ -1.74
NIP7	YPL211W	UBS1	P38290	277 aa		4.18	□□□□□ -1.74
NIP7	YPL211W	NUG1	P40010	520 aa	Known RBP	4.18	□□□□□ -1.74
NIP7	YPL211W	DOT5	P40553	215 aa		4.18	□□□□□ -1.74
NIP7	YPL211W	RSC8	P43609	557 aa	Known RBP	4.18	□□□□□ -1.74
NIP7	YPL211W	YJR039W	P47107	1121 aa		4.18	□□□□□ -1.74
NIP7	YPL211W	TAH11	P47112	604 aa		4.18	□□□□□ -1.74
NIP7	YPL211W	PAP2	P53632	584 aa	Known RBP	4.18	□□□□□ -1.74
NIP7	YPL211W	EDE1	P34216	1381 aa		4.17	□□□□□ -1.74
NIP7	YPL211W	THR1	P17423	357 aa	Known RBP	4.17	□□□□□ -1.74
NIP7	YPL211W	PEX2	P32800	271 aa		4.17	□□□□□ -1.74
NIP7	YPL211W	PPZ2	P33329	710 aa		4.17	□□□□□ -1.74
NIP7	YPL211W	MGS1	P40151	587 aa		4.17	□□□□□ -1.74
NIP7	YPL211W	GPD1	Q00055	391 aa	Known RBP	4.17	□□□□□ -1.74
NIP7	YPL211W	LGE1	Q02796	332 aa	Known RBP	4.17	□□□□□ -1.74
NIP7	YPL211W	VPS36	Q06696	566 aa		4.17	□□□□□ -1.74
NIP7	YPL211W	DIA2	Q08496	732 aa	Predicted RBP	4.17	□□□□□ -1.74
NIP7	YPL211W	RIM15	P43565	1770 aa		4.17	□□□□□ -1.74
NIP7	YPL211W	YRF1-4	O13559	1382 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	HCA4	P20448	770 aa	Known RBP	4.16	□□□□□ -1.74
NIP7	YPL211W	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	SET3	P36124	751 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	GLG1	P36143	616 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	ARG2	P40360	574 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	RPN11	P43588	306 aa	Known RBP	4.16	□□□□□ -1.74
NIP7	YPL211W	CTR1	P49573	406 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	RRP46	P53256	223 aa	Predicted RBP	4.16	□□□□□ -1.74
NIP7	YPL211W	YML122C	Q03207	126 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	THI22	Q06490	572 aa		4.16	□□□□□ -1.74
NIP7	YPL211W	DMC1	P25453	334 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	HSP104	P31539	908 aa	Known RBP	4.15	□□□□□ -1.75
NIP7	YPL211W	YKR075C	P36155	307 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	NMD2	P38798	1089 aa	Known RBP	4.15	□□□□□ -1.75
NIP7	YPL211W	ATF1	P40353	525 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	DSD1	P53095	428 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	ATG4	P53867	494 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	ADE16	P54113	591 aa	Known RBP	4.15	□□□□□ -1.75
NIP7	YPL211W	IOC4	Q04213	475 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	VHS3	Q08438	674 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	TAF3	Q12297	353 aa		4.15	□□□□□ -1.75
NIP7	YPL211W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
NIP7	YPL211W	IMG2	P25642	146 aa	Predicted RBP	4.14	□□□□□ -1.75
NIP7	YPL211W	EMP70	P32802	667 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	YPT53	P36019	220 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	BIT2	P38346	545 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	TDA3	P38758	523 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	RTR1	P40084	226 aa	Predicted RBP	4.14	□□□□□ -1.75
NIP7	YPL211W	PIG2	P40187	538 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	YJR096W	P47137	282 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	HLJ1	P48353	224 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	RFX1	P48743	811 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	YLR407W	Q06070	228 aa		4.14	□□□□□ -1.75
NIP7	YPL211W	FRS1	P15624	595 aa	Known RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	FEN2	P25621	512 aa	Known RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	PRP19	P32523	503 aa	Known RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	MAL31	P38156	614 aa		4.13	□□□□□ -1.75
NIP7	YPL211W	YHR097C	P38809	366 aa	Known RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	RIX1	P38883	763 aa	Predicted RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	BEM4	P39011	633 aa		4.13	□□□□□ -1.75
NIP7	YPL211W	BDH2	P39713	417 aa		4.13	□□□□□ -1.75
NIP7	YPL211W	NPR2	P39923	615 aa		4.13	□□□□□ -1.75
NIP7	YPL211W	YIL077C	P40508	320 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 199.2 ms