RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	TGL5	Q12043	749 aa		4.2	□□□□□ -1.74
VPS30	YPL120W	WRS1	Q12109	432 aa	Known RBP	4.2	□□□□□ -1.74
VPS30	YPL120W	TOP3	P13099	656 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	MDM10	P18409	493 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	YCL002C	P25565	263 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	FMP52	P40008	231 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	COQ11	Q05892	277 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	OSH2	Q12451	1283 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VPS30	YPL120W	DMC1	P25453	334 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	ILV6	P25605	309 aa	Known RBP	4.19	□□□□□ -1.74
VPS30	YPL120W	BCD1	P38772	366 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	DAM1	P53267	343 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	YNL034W	P53963	612 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	YNL018C	P53976	612 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	NAN1	Q02931	896 aa	Known RBP	4.19	□□□□□ -1.74
VPS30	YPL120W	AFT2	Q08957	416 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	YNL162W-A	Q3E7A8	72 aa		4.19	□□□□□ -1.74
VPS30	YPL120W	PER1	P25625	357 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	PPZ1	P26570	692 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	MGM1	P32266	881 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	FLO10	P36170	1169 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	NOC2	P39744	710 aa	Known RBP	4.18	□□□□□ -1.74
VPS30	YPL120W	TEL2	P53038	688 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	IRC4	Q03036	179 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	HOF1	Q05080	669 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	ASM4	Q05166	528 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	FMP27	Q06179	2628 aa		4.18	□□□□□ -1.74
VPS30	YPL120W	LCB1	P25045	558 aa	Known RBP	4.17	□□□□□ -1.74
VPS30	YPL120W	EMC3	P36039	253 aa		4.17	□□□□□ -1.74
VPS30	YPL120W	AKL1	P38080	1108 aa	Known RBP	4.17	□□□□□ -1.74
VPS30	YPL120W	YTA12	P40341	825 aa		4.17	□□□□□ -1.74
VPS30	YPL120W	ARO10	Q06408	635 aa		4.17	□□□□□ -1.74
VPS30	YPL120W	IRA2	P19158	3079 aa		4.17	□□□□□ -1.74
VPS30	YPL120W	ADY2	P25613	283 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	URK1	P27515	501 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
VPS30	YPL120W	SIC1	P38634	284 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	SET5	P38890	526 aa	Known RBP	4.16	□□□□□ -1.74
VPS30	YPL120W	YJL206C	P39529	758 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	FMP10	P40098	244 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	HOS4	P40480	1083 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	SKP2	P42843	763 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	UBP6	P43593	499 aa	Known RBP	4.16	□□□□□ -1.74
VPS30	YPL120W	MTR3	P48240	250 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS30	YPL120W	SWI1	P09547	1314 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	GYP8	P43570	497 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	UBC11	P52492	156 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	VPS64	Q03944	604 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	THI3	Q07471	609 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	SSF2	Q12153	453 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS30	YPL120W	ATG11	Q12527	1178 aa		4.16	□□□□□ -1.74
VPS30	YPL120W	VMA2	P16140	517 aa	Known RBP	4.15	□□□□□ -1.75
VPS30	YPL120W	HSP60	P19882	572 aa	Known RBP	4.15	□□□□□ -1.75
VPS30	YPL120W	SPO11	P23179	398 aa		4.15	□□□□□ -1.75
VPS30	YPL120W	IMG2	P25642	146 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS30	YPL120W	YBR259W	P38338	688 aa		4.15	□□□□□ -1.75
VPS30	YPL120W	SHR5	P41912	237 aa		4.15	□□□□□ -1.75
VPS30	YPL120W	YGR283C	P53336	341 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS30	YPL120W	SMX3	P54999	86 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS30	YPL120W	NSE3	Q05541	303 aa		4.15	□□□□□ -1.75
VPS30	YPL120W	REH1	Q06709	432 aa		4.15	□□□□□ -1.75
VPS30	YPL120W	YDL124W	Q07551	312 aa	Known RBP	4.15	□□□□□ -1.75
VPS30	YPL120W	THI21	Q08975	551 aa		4.15	□□□□□ -1.75
VPS30	YPL120W	TOM70	P07213	617 aa	Known RBP	4.14	□□□□□ -1.75
VPS30	YPL120W	YKR018C	P36114	725 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	REV7	P38927	245 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	MET13	P53128	600 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	YAP1802	P53309	568 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	APM1	Q00776	475 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS30	YPL120W	YDR514C	Q04408	483 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	EMI2	Q04409	500 aa	Known RBP	4.14	□□□□□ -1.75
VPS30	YPL120W	GAD1	Q04792	585 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	THI7	Q05998	598 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	RTP1	Q12751	981 aa		4.14	□□□□□ -1.75
VPS30	YPL120W	SWI6	P09959	803 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	ARP1	P38696	384 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	TOM71	P38825	639 aa	Known RBP	4.13	□□□□□ -1.75
VPS30	YPL120W	YUR1	P26725	428 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	HIR1	P32479	840 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	NDC80	P40460	691 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	YGR125W	P53273	1036 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	DAK1	P54838	584 aa	Known RBP	4.13	□□□□□ -1.75
VPS30	YPL120W	GPR1	Q12361	961 aa		4.13	□□□□□ -1.75
VPS30	YPL120W	MLP1	Q02455	1875 aa	Known RBP	4.12	□□□□□ -1.75
VPS30	YPL120W	CIT1	P00890	479 aa		4.12	□□□□□ -1.75
VPS30	YPL120W	SUP35	P05453	685 aa	Known RBP	4.12	□□□□□ -1.75
VPS30	YPL120W	YBL028C	P38202	106 aa		4.12	□□□□□ -1.75
VPS30	YPL120W	NUG1	P40010	520 aa	Known RBP	4.12	□□□□□ -1.75
VPS30	YPL120W	TEX1	P53851	422 aa	Known RBP	4.12	□□□□□ -1.75
VPS30	YPL120W	FCP1	Q03254	732 aa		4.12	□□□□□ -1.75
VPS30	YPL120W	TAF3	Q12297	353 aa		4.12	□□□□□ -1.75
VPS30	YPL120W	SAC3	P46674	1301 aa		4.12	□□□□□ -1.75
VPS30	YPL120W	ECM29	P38737	1868 aa		4.12	□□□□□ -1.75
VPS30	YPL120W	DIF1	O13577	133 aa		4.11	□□□□□ -1.75
VPS30	YPL120W	BAP3	P41815	604 aa		4.11	□□□□□ -1.75
VPS30	YPL120W	CCT7	P42943	550 aa	Known RBP	4.11	□□□□□ -1.75
VPS30	YPL120W	TIM54	P47045	478 aa		4.11	□□□□□ -1.75
VPS30	YPL120W	SGM1	P47166	707 aa		4.11	□□□□□ -1.75
VPS30	YPL120W	ZIP2	P53061	704 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms