RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C KHA1P40309 873 aa3.58□□□□□ -1.84
SHE4YOR035C NMA2P53204 395 aa3.58□□□□□ -1.84
SHE4YOR035C GFA1P14742 717 aaKnown RBP3.58□□□□□ -1.84
SHE4YOR035C SQS1P53866 767 aaKnown RBP3.58□□□□□ -1.84
SHE4YOR035C AIM41Q12032 185 aa3.58□□□□□ -1.84
SHE4YOR035C HEM12P32347 362 aaPredicted RBP3.57□□□□□ -1.84
SHE4YOR035C PLC1P32383 869 aa3.57□□□□□ -1.84
SHE4YOR035C MF(ALPHA)2P32435 120 aa3.57□□□□□ -1.84
SHE4YOR035C GMH1P36125 273 aa3.57□□□□□ -1.84
SHE4YOR035C TDP1P38319 544 aa3.57□□□□□ -1.84
SHE4YOR035C ENP1P38333 483 aaKnown RBP3.57□□□□□ -1.84
SHE4YOR035C EMP65P40085 556 aa3.57□□□□□ -1.84
SHE4YOR035C FTR1P40088 404 aa3.57□□□□□ -1.84
SHE4YOR035C FDC1Q03034 503 aa3.57□□□□□ -1.84
SHE4YOR035C RKI1Q12189 258 aa3.57□□□□□ -1.84
SHE4YOR035C KCC4P25389 1037 aa3.56□□□□□ -1.84
SHE4YOR035C MSS1P32559 526 aaPredicted RBP3.56□□□□□ -1.84
SHE4YOR035C ELF1P36053 145 aa3.56□□□□□ -1.84
SHE4YOR035C APL3P38065 1025 aa3.56□□□□□ -1.84
SHE4YOR035C CRG1P38892 291 aaRIP-Chip data3.56□□□□□ -1.84not detected
SHE4YOR035C QRI1P43123 477 aaKnown RBP3.56□□□□□ -1.84
SHE4YOR035C VPS73P53142 486 aaKnown RBP3.56□□□□□ -1.84
SHE4YOR035C SPC98P53540 846 aa3.56□□□□□ -1.84
SHE4YOR035C TIM50Q02776 476 aa3.56□□□□□ -1.84
SHE4YOR035C PHM6Q05637 104 aa3.56□□□□□ -1.84
SHE4YOR035C ECM38Q05902 660 aaPredicted RBP3.56□□□□□ -1.84
SHE4YOR035C IZH3Q07959 543 aa3.56□□□□□ -1.84
SHE4YOR035C TAF3Q12297 353 aa3.56□□□□□ -1.84
SHE4YOR035C SPA2P23201 1466 aaKnown RBP3.56□□□□□ -1.84
SHE4YOR035C YEL076C-AP0CX16 216 aa3.56□□□□□ -1.84
SHE4YOR035C YLR464WP0CX17 216 aa3.56□□□□□ -1.84
SHE4YOR035C SRP68P38687 599 aaKnown RBP3.56□□□□□ -1.84
SHE4YOR035C YEL076CP39971 216 aa3.56□□□□□ -1.84
SHE4YOR035C DIP5P53388 608 aa3.56□□□□□ -1.84
SHE4YOR035C HOL1P53389 586 aa3.56□□□□□ -1.84
SHE4YOR035C YCG1Q06680 1035 aa3.56□□□□□ -1.84
SHE4YOR035C PEX15Q08215 383 aa3.56□□□□□ -1.84
SHE4YOR035C CWC2Q12046 339 aaPredicted RBP3.56□□□□□ -1.84
SHE4YOR035C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
SHE4YOR035C LAM4P38800 1345 aa3.55□□□□□ -1.84
SHE4YOR035C HMG2P12684 1045 aa3.55□□□□□ -1.84
SHE4YOR035C TOM20P35180 183 aa3.55□□□□□ -1.84
SHE4YOR035C CDS1P38221 457 aa3.55□□□□□ -1.84
SHE4YOR035C UBS1P38290 277 aa3.55□□□□□ -1.84
SHE4YOR035C PPE1P38796 400 aa3.55□□□□□ -1.84
SHE4YOR035C HLR1Q04429 423 aa3.55□□□□□ -1.84
SHE4YOR035C BMS1Q08965 1183 aaKnown RBP3.55□□□□□ -1.84
SHE4YOR035C UFO1Q04511 668 aa3.55□□□□□ -1.84
SHE4YOR035C MTC7P32633 139 aa3.54□□□□□ -1.84
SHE4YOR035C EHT1P38295 451 aa3.54□□□□□ -1.84
SHE4YOR035C IRC5P43610 853 aa3.54□□□□□ -1.84
SHE4YOR035C TAH11P47112 604 aa3.54□□□□□ -1.84
SHE4YOR035C EAF5P39995 279 aa3.54□□□□□ -1.84
SHE4YOR035C PMT6P42934 759 aa3.54□□□□□ -1.84
SHE4YOR035C MTD1Q02046 320 aaKnown RBP3.54□□□□□ -1.84
SHE4YOR035C YOR378WQ08902 515 aa3.54□□□□□ -1.84
SHE4YOR035C KOG1P38873 1557 aa3.54□□□□□ -1.84
SHE4YOR035C RMA1P36001 430 aaKnown RBP3.53□□□□□ -1.84
SHE4YOR035C YGR054WP53235 642 aaKnown RBP3.53□□□□□ -1.84
SHE4YOR035C MDR1P53258 950 aa3.53□□□□□ -1.84
SHE4YOR035C MFM1Q02783 413 aa3.53□□□□□ -1.84
SHE4YOR035C VPS5Q92331 675 aa3.53□□□□□ -1.84
SHE4YOR035C SPO11P23179 398 aa3.53□□□□□ -1.84
SHE4YOR035C GRX7P38068 203 aa3.53□□□□□ -1.84
SHE4YOR035C YIL166CP40445 542 aa3.53□□□□□ -1.84
SHE4YOR035C SNF12P53628 566 aa3.53□□□□□ -1.84
SHE4YOR035C NGL2Q03264 515 aaKnown RBP3.53□□□□□ -1.84
SHE4YOR035C CEF1Q03654 590 aaPredicted RBP3.53□□□□□ -1.84
SHE4YOR035C TRS23Q03784 219 aa3.53□□□□□ -1.84
SHE4YOR035C SUT2Q12286 268 aa3.53□□□□□ -1.84
SHE4YOR035C MDM20Q12387 796 aaKnown RBP3.53□□□□□ -1.84
SHE4YOR035C PPZ2P33329 710 aa3.52□□□□□ -1.85
SHE4YOR035C MRPL7P36519 292 aa3.52□□□□□ -1.85
SHE4YOR035C MUP3P38734 546 aa3.52□□□□□ -1.85
SHE4YOR035C YEL025CP39991 1188 aa3.52□□□□□ -1.85
SHE4YOR035C THI6P41835 540 aa3.52□□□□□ -1.85
SHE4YOR035C YDL183CP48569 320 aa3.52□□□□□ -1.85
SHE4YOR035C PEF1P53238 335 aa3.52□□□□□ -1.85
SHE4YOR035C DAK1P54838 584 aaKnown RBP3.52□□□□□ -1.85
SHE4YOR035C YDR179W-AQ03983 463 aa3.52□□□□□ -1.85
SHE4YOR035C SND1Q04007 877 aa3.52□□□□□ -1.85
SHE4YOR035C STE12P13574 688 aa3.52□□□□□ -1.85
SHE4YOR035C DHR2P36009 735 aaPredicted RBP3.52□□□□□ -1.85
SHE4YOR035C STL1P39932 569 aa3.52□□□□□ -1.85
SHE4YOR035C YIL092WP40497 633 aa3.52□□□□□ -1.85
SHE4YOR035C YNL034WP53963 612 aa3.52□□□□□ -1.85
SHE4YOR035C YNL018CP53976 612 aa3.52□□□□□ -1.85
SHE4YOR035C APM1Q00776 475 aaPredicted RBP3.52□□□□□ -1.85
SHE4YOR035C EFR3Q03653 782 aaKnown RBP3.52□□□□□ -1.85
SHE4YOR035C SLX4Q12098 748 aa3.52□□□□□ -1.85
SHE4YOR035C TMA7Q3E764 64 aaKnown RBP3.52□□□□□ -1.85
SHE4YOR035C TUF1P02992 437 aaKnown RBP3.51□□□□□ -1.85
SHE4YOR035C EMP70P32802 667 aa3.51□□□□□ -1.85
SHE4YOR035C YMC2P38087 329 aa3.51□□□□□ -1.85
SHE4YOR035C MIT1P40002 666 aa3.51□□□□□ -1.85
SHE4YOR035C TAD3Q9URQ3 322 aa3.51□□□□□ -1.85
SHE4YOR035C SEC12P11655 471 aa3.51□□□□□ -1.85
SHE4YOR035C YJL193WP39542 402 aa3.51□□□□□ -1.85
SHE4YOR035C LRO1P40345 661 aa3.51□□□□□ -1.85
SHE4YOR035C PEX8P53248 589 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms