RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP3	YNL257C	PYC1	P11154	1178 aa	Known RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	NCP1	P16603	691 aa	Known RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	IME2	P32581	645 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SIP3	YNL257C	PET127	P32606	800 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	TSA1	P34760	196 aa	Known RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	APL2	P36000	726 aa	Predicted RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	GET2	P40056	285 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	BRE4	Q07660	1125 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	GPB1	Q08886	897 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	CDC20	P26309	610 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	TGL1	P34163	548 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	CTF13	P35203	478 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	RMA1	P36001	430 aa	Known RBP	3.09	□□□□□ -1.92
SIP3	YNL257C	YKR075C	P36155	307 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	BIT61	P47041	543 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	NOP9	P47077	666 aa	Known RBP	3.09	□□□□□ -1.92
SIP3	YNL257C	EXG2	P52911	562 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	HOL1	P53389	586 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	TEX1	P53851	422 aa	Known RBP	3.09	□□□□□ -1.92
SIP3	YNL257C	COG4	Q06096	861 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	NUP159	P40477	1460 aa		3.09	□□□□□ -1.92
SIP3	YNL257C	RNR1	P21524	888 aa	Known RBP	3.08	□□□□□ -1.92
SIP3	YNL257C	RPP1	P38786	293 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	LYS9	P38999	446 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	FOL2	P51601	243 aa	Known RBP	3.08	□□□□□ -1.92
SIP3	YNL257C	GCN5	Q03330	439 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	NOP12	Q08208	459 aa	Known RBP	3.08	□□□□□ -1.92
SIP3	YNL257C	TGL5	Q12043	749 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	DBP10	Q12389	995 aa	Known RBP	3.08	□□□□□ -1.92
SIP3	YNL257C	MRPL22	P53881	309 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	MCM21	Q06675	368 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	SMC4	Q12267	1418 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	KAR4	P25583	335 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	STT3	P39007	718 aa	Known RBP	3.08	□□□□□ -1.92
SIP3	YNL257C	TAF4	P50105	388 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	PEF1	P53238	335 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	SNO2	P53823	222 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	PSF3	Q12146	194 aa		3.08	□□□□□ -1.92
SIP3	YNL257C	CFT1	Q06632	1357 aa	Known RBP	3.08	□□□□□ -1.92
SIP3	YNL257C	DGR2	P32330	852 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	SSH4	P32343	579 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	MCM10	P32354	571 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	YBR259W	P38338	688 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	DUN1	P39009	513 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	ERP2	P39704	215 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	ECM1	P39715	212 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	PUG1	P40100	303 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	GTR1	Q00582	310 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	PKH1	Q03407	766 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	PEX19	Q07418	342 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	SWM1	Q12379	170 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	VAS1	P07806	1104 aa	Known RBP	3.07	□□□□□ -1.92
SIP3	YNL257C	CBP3	P21560	335 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	CRG1	P38892	291 aa	RIP-Chip data	3.07	□□□□□ -1.92	not detected
SIP3	YNL257C	PLB1	P39105	664 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	BFA1	P47113	574 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	INP52	P50942	1183 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	TAN1	P53072	289 aa	Predicted RBP	3.07	□□□□□ -1.92
SIP3	YNL257C	RRT6	P53117	311 aa	Predicted RBP	3.07	□□□□□ -1.92
SIP3	YNL257C	REC102	Q02721	264 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	NSE5	Q03718	556 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	RRI2	Q12348	645 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	ARG1	P22768	420 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	APM3	P38153	483 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	CPR6	P53691	371 aa	Known RBP	3.07	□□□□□ -1.92
SIP3	YNL257C	MCH5	Q08777	521 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	DNF3	Q12674	1656 aa		3.07	□□□□□ -1.92
SIP3	YNL257C	SNT2	P53127	1403 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	MSH1	P25846	959 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	FRD1	P32614	470 aa	Known RBP	3.06	□□□□□ -1.92
SIP3	YNL257C	LST4	P34239	828 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	PRM2	P40534	656 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	BUL1	P48524	976 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	MTL1	P53214	551 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	MEP3	P53390	489 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	YLR224W	Q05947	369 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	ACK1	Q07622	623 aa	Predicted RBP	3.06	□□□□□ -1.92
SIP3	YNL257C	YDR056C	Q12025	205 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	DFG16	Q99234	619 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	ECM3	Q99252	613 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	RPA190	P10964	1664 aa	Known RBP	3.06	□□□□□ -1.92
SIP3	YNL257C	YOR093C	Q12275	1648 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	URA3	P03962	267 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	YBR138C	P38277	524 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	SAW1	P39735	261 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	BAP3	P41815	604 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	TRM11	Q12463	433 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	PHO81	P17442	1178 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	MCM3	P24279	971 aa	Known RBP	3.06	□□□□□ -1.92
SIP3	YNL257C	HOS4	P40480	1083 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	YBP2	P53169	641 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	NEW1	Q08972	1196 aa	Known RBP	3.06	□□□□□ -1.92
SIP3	YNL257C	VPS5	Q92331	675 aa		3.06	□□□□□ -1.92
SIP3	YNL257C	YHR033W	P38690	423 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	FTR1	P40088	404 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	PXA1	P41909	870 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	UBA2	P52488	636 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	ACS1	Q01574	713 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	THI22	Q06490	572 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms