RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C MCH5Q08777 521 aa4.02□□□□□ -1.77
WHI3YNL197C TRM13Q12383 476 aa4.02□□□□□ -1.77
WHI3YNL197C ATG11Q12527 1178 aa4.02□□□□□ -1.77
WHI3YNL197C URA3P03962 267 aa4.02□□□□□ -1.77
WHI3YNL197C CAD1P24813 409 aaKnown RBP4.02□□□□□ -1.77
WHI3YNL197C MSH1P25846 959 aa4.02□□□□□ -1.77
WHI3YNL197C DCG1P32460 244 aa4.02□□□□□ -1.77
WHI3YNL197C BEM3P32873 1128 aa4.02□□□□□ -1.77
WHI3YNL197C BNA1P47096 177 aa4.02□□□□□ -1.77
WHI3YNL197C CPR6P53691 371 aaKnown RBP4.02□□□□□ -1.77
WHI3YNL197C GTR1Q00582 310 aa4.02□□□□□ -1.77
WHI3YNL197C PPN1Q04119 674 aa4.02□□□□□ -1.77
WHI3YNL197C TMA64Q04600 565 aaKnown RBP4.02□□□□□ -1.77
WHI3YNL197C STE11P23561 717 aa4.01□□□□□ -1.77
WHI3YNL197C KIN82P25341 720 aa4.01□□□□□ -1.77
WHI3YNL197C SSH4P32343 579 aa4.01□□□□□ -1.77
WHI3YNL197C MSS1P32559 526 aaPredicted RBP4.01□□□□□ -1.77
WHI3YNL197C FRD1P32614 470 aaKnown RBP4.01□□□□□ -1.77
WHI3YNL197C YLF2P38746 405 aa4.01□□□□□ -1.77
WHI3YNL197C NUP60P39705 539 aa4.01□□□□□ -1.77
WHI3YNL197C PUG1P40100 303 aa4.01□□□□□ -1.77
WHI3YNL197C CTK1Q03957 528 aaKnown RBP4.01□□□□□ -1.77
WHI3YNL197C TRI1Q05024 226 aa4.01□□□□□ -1.77
WHI3YNL197C TUP1P16649 713 aa4□□□□□ -1.77
WHI3YNL197C PRP22P24384 1145 aaKnown RBP4□□□□□ -1.77
WHI3YNL197C TOD6P34219 525 aa4□□□□□ -1.77
WHI3YNL197C EHT1P38295 451 aa4□□□□□ -1.77
WHI3YNL197C HRB1P38922 454 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
WHI3YNL197C SPO1P53541 631 aa4□□□□□ -1.77
WHI3YNL197C YCG1Q06680 1035 aa4□□□□□ -1.77
WHI3YNL197C SIR1P21691 654 aa4□□□□□ -1.77
WHI3YNL197C RPA135P22138 1203 aaKnown RBP4□□□□□ -1.77
WHI3YNL197C MCM3P24279 971 aaKnown RBP4□□□□□ -1.77
WHI3YNL197C YCL049CP25577 312 aa4□□□□□ -1.77
WHI3YNL197C BCS1P32839 456 aa4□□□□□ -1.77
WHI3YNL197C AMA1P50082 593 aa4□□□□□ -1.77
WHI3YNL197C MUP1P50276 574 aa4□□□□□ -1.77
WHI3YNL197C TIM50Q02776 476 aa4□□□□□ -1.77
WHI3YNL197C BLS1Q06071 122 aa4□□□□□ -1.77
WHI3YNL197C RPS9BP05755 195 aaKnown RBP3.99□□□□□ -1.77
WHI3YNL197C MTF2P10849 440 aa3.99□□□□□ -1.77
WHI3YNL197C FEN2P25621 512 aaKnown RBP3.99□□□□□ -1.77
WHI3YNL197C TAF5P38129 798 aa3.99□□□□□ -1.77
WHI3YNL197C CCT3P39077 534 aaKnown RBP3.99□□□□□ -1.77
WHI3YNL197C VPS27P40343 622 aaKnown RBP3.99□□□□□ -1.77
WHI3YNL197C YIR042CP40586 236 aa3.99□□□□□ -1.77
WHI3YNL197C TAH11P47112 604 aa3.99□□□□□ -1.77
WHI3YNL197C FDC1Q03034 503 aa3.99□□□□□ -1.77
WHI3YNL197C YFT2Q06676 274 aa3.99□□□□□ -1.77
WHI3YNL197C PSY4P38193 441 aa3.98□□□□□ -1.77
WHI3YNL197C YBR138CP38277 524 aa3.98□□□□□ -1.77
WHI3YNL197C COS111P38308 924 aa3.98□□□□□ -1.77
WHI3YNL197C BCD1P38772 366 aa3.98□□□□□ -1.77
WHI3YNL197C ELO3P40319 345 aa3.98□□□□□ -1.77
WHI3YNL197C YIL077CP40508 320 aa3.98□□□□□ -1.77
WHI3YNL197C GSM1P42950 618 aa3.98□□□□□ -1.77
WHI3YNL197C RFX1P48743 811 aa3.98□□□□□ -1.77
WHI3YNL197C UBC11P52492 156 aa3.98□□□□□ -1.77
WHI3YNL197C SQS1P53866 767 aaKnown RBP3.98□□□□□ -1.77
WHI3YNL197C ARR3Q06598 404 aa3.98□□□□□ -1.77
WHI3YNL197C PHO5P00635 467 aa3.98□□□□□ -1.77
WHI3YNL197C PRP45P28004 379 aaPredicted RBP3.98□□□□□ -1.77
WHI3YNL197C MCM10P32354 571 aa3.98□□□□□ -1.77
WHI3YNL197C POL31P46957 487 aa3.98□□□□□ -1.77
WHI3YNL197C RRT6P53117 311 aaPredicted RBP3.98□□□□□ -1.77
WHI3YNL197C PRP43P53131 767 aaKnown RBP3.98□□□□□ -1.77
WHI3YNL197C ACS1Q01574 713 aa3.98□□□□□ -1.77
WHI3YNL197C COG4Q06096 861 aa3.98□□□□□ -1.77
WHI3YNL197C IWR1Q07532 353 aaPredicted RBP3.98□□□□□ -1.77
WHI3YNL197C AAD4Q07747 329 aa3.98□□□□□ -1.77
WHI3YNL197C DIA2Q08496 732 aaPredicted RBP3.98□□□□□ -1.77
WHI3YNL197C IRC13Q08630 104 aa3.98□□□□□ -1.77
WHI3YNL197C YOL087CQ99247 1116 aa3.98□□□□□ -1.77
WHI3YNL197C PMA1P05030 918 aaKnown RBP3.97□□□□□ -1.77
WHI3YNL197C SIR3P06701 978 aa3.97□□□□□ -1.77
WHI3YNL197C POL3P15436 1097 aa3.97□□□□□ -1.77
WHI3YNL197C SWI4P25302 1093 aaKnown RBP3.97□□□□□ -1.77
WHI3YNL197C YCR015CP25616 317 aa3.97□□□□□ -1.77
WHI3YNL197C YJL163CP46996 555 aa3.97□□□□□ -1.77
WHI3YNL197C MNN10P50108 393 aaKnown RBP3.97□□□□□ -1.77
WHI3YNL197C UBA2P52488 636 aa3.97□□□□□ -1.77
WHI3YNL197C MCM6P53091 1017 aaKnown RBP3.97□□□□□ -1.77
WHI3YNL197C MEP3P53390 489 aa3.97□□□□□ -1.77
WHI3YNL197C DLT1Q04216 342 aa3.97□□□□□ -1.77
WHI3YNL197C RRI2Q12348 645 aa3.97□□□□□ -1.77
WHI3YNL197C SNF1P06782 633 aaKnown RBP3.96□□□□□ -1.77
WHI3YNL197C CAF20P12962 161 aaKnown RBP3.96□□□□□ -1.77
WHI3YNL197C RNQ1P25367 405 aa3.96□□□□□ -1.77
WHI3YNL197C SET3P36124 751 aa3.96□□□□□ -1.77
WHI3YNL197C TAF1P46677 1066 aa3.96□□□□□ -1.77
WHI3YNL197C IML2P47031 731 aa3.96□□□□□ -1.77
WHI3YNL197C PAN2P53010 1115 aaPredicted RBP3.96□□□□□ -1.77
WHI3YNL197C CRD1Q07560 283 aa3.96□□□□□ -1.77
WHI3YNL197C NEW1Q08972 1196 aaKnown RBP3.96□□□□□ -1.77
WHI3YNL197C HOS1Q12214 470 aa3.96□□□□□ -1.77
WHI3YNL197C YLR358CO13565 187 aa3.96□□□□□ -1.78
WHI3YNL197C ADE3P07245 946 aaKnown RBP3.96□□□□□ -1.78
WHI3YNL197C IFA38P38286 347 aa3.96□□□□□ -1.78
WHI3YNL197C SFB3P38810 929 aa3.96□□□□□ -1.78
WHI3YNL197C ERP2P39704 215 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms