RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	RPC25	P35718	212 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	YIL161W	P40449	235 aa	Known RBP	4.98	□□□□□ -1.61
ATM1	YMR301C	HYR1	P40581	163 aa	Known RBP	4.98	□□□□□ -1.61
ATM1	YMR301C	CDC1	P40986	491 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	VNX1	P42839	908 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	GUF1	P46943	645 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	MTD1	Q02046	320 aa	Known RBP	4.98	□□□□□ -1.61
ATM1	YMR301C	YAP7	Q08182	245 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	DDC1	Q08949	612 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	MPD2	Q99316	277 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	AI5_BETA	Q9ZZX0	354 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	DAL2	P25335	343 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	XRS2	P33301	854 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	FMO1	P38866	432 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	DOT6	P40059	670 aa	Known RBP	4.98	□□□□□ -1.61
ATM1	YMR301C	ASG7	P46993	209 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	STR2	P47164	639 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	YGL036W	P53185	909 aa	Predicted RBP	4.98	□□□□□ -1.61
ATM1	YMR301C	IMP4	P53941	290 aa	Known RBP	4.98	□□□□□ -1.61
ATM1	YMR301C	YOR387C	Q08910	206 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	APC11	Q12157	165 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	NBP2	Q12163	236 aa		4.98	□□□□□ -1.61
ATM1	YMR301C	RPL40A	P0CH08	128 aa	Known RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	RPL40B	P0CH09	128 aa	Known RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	RPS6A	P0CX37	236 aa	Known RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	RPS6B	P0CX38	236 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	VAC17	P25591	423 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	GPI10	P30777	616 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	ISC10	P32645	267 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	SPT23	P35210	1082 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	RPS26A	P39938	119 aa	Known RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	RPS26B	P39939	119 aa	Known RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	PFD1	P46988	109 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	NMA2	P53204	395 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	SEG1	Q04279	960 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	YLR297W	Q05899	129 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	COG4	Q06096	861 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	RCL1	Q08096	367 aa	Predicted RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	TRE1	Q08919	783 aa		4.97	□□□□□ -1.61
ATM1	YMR301C	LPX1	Q12405	387 aa	Known RBP	4.97	□□□□□ -1.61
ATM1	YMR301C	RPS9A	O13516	197 aa	Known RBP	4.96	□□□□□ -1.61
ATM1	YMR301C	PDR1	P12383	1068 aa		4.96	□□□□□ -1.61
ATM1	YMR301C	TIF5	P38431	405 aa	Known RBP	4.96	□□□□□ -1.61
ATM1	YMR301C	CTM1	P38818	585 aa		4.96	□□□□□ -1.61
ATM1	YMR301C	RSM26	P47141	266 aa		4.96	□□□□□ -1.61
ATM1	YMR301C	COS5	P47187	383 aa		4.96	□□□□□ -1.61
ATM1	YMR301C	DRN1	P53255	507 aa	Known RBP	4.96	□□□□□ -1.61
ATM1	YMR301C	EBS1	Q03466	884 aa	Known RBP	4.96	□□□□□ -1.61
ATM1	YMR301C	HRD3	Q05787	833 aa		4.96	□□□□□ -1.61
ATM1	YMR301C	CSR1	Q06705	408 aa	Known RBP	4.96	□□□□□ -1.61
ATM1	YMR301C	CDC37	P06101	506 aa	Known RBP	4.96	□□□□□ -1.62
ATM1	YMR301C	REV1	P12689	985 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	MRC1	P25588	1096 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	APL1	P27351	700 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	CSG2	P35206	410 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	NOP4	P37838	685 aa	Known RBP	4.96	□□□□□ -1.62
ATM1	YMR301C	YBR197C	P38306	217 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	RPT2	P40327	437 aa	Known RBP	4.96	□□□□□ -1.62
ATM1	YMR301C	CIR1	P42940	261 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	MND1	P53102	219 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	YNL035C	P53962	389 aa	Known RBP	4.96	□□□□□ -1.62
ATM1	YMR301C	SPO75	Q07798	868 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	BDS1	Q08347	646 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	VPS54	Q12071	889 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	YGR161W-C	Q3E744	92 aa		4.96	□□□□□ -1.62
ATM1	YMR301C	KIN3	P22209	435 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	KTR4	P38131	464 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	NMD3	P38861	518 aa	Known RBP	4.95	□□□□□ -1.62
ATM1	YMR301C	ERG10	P41338	398 aa	Known RBP	4.95	□□□□□ -1.62
ATM1	YMR301C	VTC4	P47075	721 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	GPD1	Q00055	391 aa	Known RBP	4.95	□□□□□ -1.62
ATM1	YMR301C	CDC55	Q00362	526 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	TOF2	Q02208	771 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	LCB4	Q12246	624 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	GSY2	P27472	705 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	YET1	P35723	206 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
ATM1	YMR301C	ATG12	P38316	186 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	DYS1	P38791	387 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	RSM25	P40496	264 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	YIR007W	P40566	764 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	COQ6	P53318	479 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	YPL062W	Q02781	134 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	PIR3	Q03180	325 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	MDM38	Q08179	573 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	FLC1	Q08967	793 aa		4.95	□□□□□ -1.62
ATM1	YMR301C	LSP1	Q12230	341 aa	Known RBP	4.95	□□□□□ -1.62
ATM1	YMR301C	TY1A-DR4	O74302	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-H	P0C2I4	478 aa	Known RBP	4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-A	P0CX57	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-PR1	P0CX58	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-OR	P0CX59	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-PR2	P0CX60	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-DR5	P0CX65	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-ER2	P0CX66	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-GR3	P0CX67	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-LR1	P0CX68	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	TY1A-MR2	P0CX69	440 aa		4.94	□□□□□ -1.62
ATM1	YMR301C	ABZ1	P37254	787 aa	Predicted RBP	4.94	□□□□□ -1.62
ATM1	YMR301C	GGA2	P38817	585 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms