RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C GAD1Q04792 585 aa5.14□□□□□ -1.59
VPS71YML041C SGO1Q08490 590 aa5.14□□□□□ -1.59
VPS71YML041C SSP2Q08646 371 aa5.14□□□□□ -1.59
VPS71YML041C ECM3Q99252 613 aa5.14□□□□□ -1.59
VPS71YML041C URA3P03962 267 aa5.13□□□□□ -1.59
VPS71YML041C HMG2P12684 1045 aa5.13□□□□□ -1.59
VPS71YML041C NCP1P16603 691 aaKnown RBP5.13□□□□□ -1.59
VPS71YML041C PRP6P19735 899 aaPredicted RBP5.13□□□□□ -1.59
VPS71YML041C CBP3P21560 335 aa5.13□□□□□ -1.59
VPS71YML041C PRP45P28004 379 aaPredicted RBP5.13□□□□□ -1.59
VPS71YML041C DCG1P32460 244 aa5.13□□□□□ -1.59
VPS71YML041C THI80P35202 319 aa5.13□□□□□ -1.59
VPS71YML041C YBR053CP38235 358 aa5.13□□□□□ -1.59
VPS71YML041C AIM3P38266 947 aaKnown RBP5.13□□□□□ -1.59
VPS71YML041C YHR033WP38690 423 aa5.13□□□□□ -1.59
VPS71YML041C CRG1P38892 291 aaRIP-Chip data5.13□□□□□ -1.59not detected
VPS71YML041C SPO1P53541 631 aa5.13□□□□□ -1.59
VPS71YML041C ERG20P08524 352 aaKnown RBP5.12□□□□□ -1.59
VPS71YML041C MTF2P10849 440 aa5.12□□□□□ -1.59
VPS71YML041C SIR1P21691 654 aa5.12□□□□□ -1.59
VPS71YML041C STE11P23561 717 aa5.12□□□□□ -1.59
VPS71YML041C MCM3P24279 971 aaKnown RBP5.12□□□□□ -1.59
VPS71YML041C PRP22P24384 1145 aaKnown RBP5.12□□□□□ -1.59
VPS71YML041C KIN82P25341 720 aa5.12□□□□□ -1.59
VPS71YML041C GFD2P25370 566 aaKnown RBP5.12□□□□□ -1.59
VPS71YML041C FTR1P40088 404 aa5.12□□□□□ -1.59
VPS71YML041C IRC24P40580 263 aa5.12□□□□□ -1.59
VPS71YML041C YIR042CP40586 236 aa5.12□□□□□ -1.59
VPS71YML041C BNA1P47096 177 aa5.12□□□□□ -1.59
VPS71YML041C TAH11P47112 604 aa5.12□□□□□ -1.59
VPS71YML041C COX18P53239 316 aa5.12□□□□□ -1.59
VPS71YML041C ENT2Q05785 613 aa5.12□□□□□ -1.59
VPS71YML041C BLS1Q06071 122 aa5.12□□□□□ -1.59
VPS71YML041C OPY2Q06810 360 aa5.12□□□□□ -1.59
VPS71YML041C RRI2Q12348 645 aa5.12□□□□□ -1.59
VPS71YML041C BIK1P11709 440 aa5.11□□□□□ -1.59
VPS71YML041C HSC82P15108 705 aaKnown RBP5.11□□□□□ -1.59
VPS71YML041C ARG1P22768 420 aa5.11□□□□□ -1.59
VPS71YML041C YCL049CP25577 312 aa5.11□□□□□ -1.59
VPS71YML041C MSS1P32559 526 aaPredicted RBP5.11□□□□□ -1.59
VPS71YML041C TAF5P38129 798 aa5.11□□□□□ -1.59
VPS71YML041C PUG1P40100 303 aa5.11□□□□□ -1.59
VPS71YML041C IML2P47031 731 aa5.11□□□□□ -1.59
VPS71YML041C AMA1P50082 593 aa5.11□□□□□ -1.59
VPS71YML041C MUP1P50276 574 aa5.11□□□□□ -1.59
VPS71YML041C GTR1Q00582 310 aa5.11□□□□□ -1.59
VPS71YML041C CTK1Q03957 528 aaKnown RBP5.11□□□□□ -1.59
VPS71YML041C AAD4Q07747 329 aa5.11□□□□□ -1.59
VPS71YML041C FEN2P25621 512 aaKnown RBP5.1□□□□□ -1.59
VPS71YML041C BCS1P32839 456 aa5.1□□□□□ -1.59
VPS71YML041C PSY4P38193 441 aa5.1□□□□□ -1.59
VPS71YML041C YBR138CP38277 524 aa5.1□□□□□ -1.59
VPS71YML041C FMO1P38866 432 aa5.1□□□□□ -1.59
VPS71YML041C CCT3P39077 534 aaKnown RBP5.1□□□□□ -1.59
VPS71YML041C NUP60P39705 539 aa5.1□□□□□ -1.59
VPS71YML041C UBA2P52488 636 aa5.1□□□□□ -1.59
VPS71YML041C ACS1Q01574 713 aa5.1□□□□□ -1.59
VPS71YML041C FDC1Q03034 503 aa5.1□□□□□ -1.59
VPS71YML041C YFT2Q06676 274 aa5.1□□□□□ -1.59
VPS71YML041C TRM13Q12383 476 aa5.1□□□□□ -1.59
VPS71YML041C YOL087CQ99247 1116 aa5.1□□□□□ -1.59
VPS71YML041C PMA1P05030 918 aaKnown RBP5.09□□□□□ -1.59
VPS71YML041C SIR3P06701 978 aa5.09□□□□□ -1.59
VPS71YML041C CAD1P24813 409 aaKnown RBP5.09□□□□□ -1.59
VPS71YML041C MCM10P32354 571 aa5.09□□□□□ -1.59
VPS71YML041C XRS2P33301 854 aa5.09□□□□□ -1.59
VPS71YML041C JNM1P36224 373 aa5.09□□□□□ -1.59
VPS71YML041C COS111P38308 924 aa5.09□□□□□ -1.59
VPS71YML041C GSM1P42950 618 aa5.09□□□□□ -1.59
VPS71YML041C MNN10P50108 393 aaKnown RBP5.09□□□□□ -1.59
VPS71YML041C UBC11P52492 156 aa5.09□□□□□ -1.59
VPS71YML041C TMA10Q06177 86 aa5.09□□□□□ -1.59
VPS71YML041C ARR3Q06598 404 aa5.09□□□□□ -1.59
VPS71YML041C YCG1Q06680 1035 aa5.09□□□□□ -1.59
VPS71YML041C CRD1Q07560 283 aa5.09□□□□□ -1.59
VPS71YML041C DIA2Q08496 732 aaPredicted RBP5.09□□□□□ -1.59
VPS71YML041C NEW1Q08972 1196 aaKnown RBP5.09□□□□□ -1.59
VPS71YML041C RTP1Q12751 981 aa5.09□□□□□ -1.59
VPS71YML041C TUF1P02992 437 aaKnown RBP5.08□□□□□ -1.6
VPS71YML041C TUP1P16649 713 aa5.08□□□□□ -1.6
VPS71YML041C GAS1P22146 559 aaKnown RBP5.08□□□□□ -1.6
VPS71YML041C ELM1P32801 640 aa5.08□□□□□ -1.6
VPS71YML041C RRN3P36070 627 aa5.08□□□□□ -1.6
VPS71YML041C IMA1P53051 589 aa5.08□□□□□ -1.6
VPS71YML041C MEP3P53390 489 aa5.08□□□□□ -1.6
VPS71YML041C GIR2Q03768 265 aaPredicted RBP5.08□□□□□ -1.6
VPS71YML041C IWR1Q07532 353 aaPredicted RBP5.08□□□□□ -1.6
VPS71YML041C MCH5Q08777 521 aa5.08□□□□□ -1.6
VPS71YML041C SSM4P40318 1319 aa5.07□□□□□ -1.6
VPS71YML041C UBC1P21734 215 aaKnown RBP5.07□□□□□ -1.6
VPS71YML041C PRP28P23394 588 aa5.07□□□□□ -1.6
VPS71YML041C YCR015CP25616 317 aa5.07□□□□□ -1.6
VPS71YML041C TOD6P34219 525 aa5.07□□□□□ -1.6
VPS71YML041C PPE1P38796 400 aa5.07□□□□□ -1.6
VPS71YML041C HRB1P38922 454 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
VPS71YML041C LRO1P40345 661 aa5.07□□□□□ -1.6
VPS71YML041C YIL077CP40508 320 aa5.07□□□□□ -1.6
VPS71YML041C RRT6P53117 311 aaPredicted RBP5.07□□□□□ -1.6
VPS71YML041C SQS1P53866 767 aaKnown RBP5.07□□□□□ -1.6
VPS71YML041C DLT1Q04216 342 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms