RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W DOT6P40059 670 aaKnown RBP3.9□□□□□ -1.79
YLR400WYLR400W USV1Q12132 391 aa3.9□□□□□ -1.79
YLR400WYLR400W ICT1Q12385 394 aa3.9□□□□□ -1.79
YLR400WYLR400W MSS18P08593 268 aa3.89□□□□□ -1.79
YLR400WYLR400W ATP12P22135 325 aa3.89□□□□□ -1.79
YLR400WYLR400W FUB1P25659 250 aa3.89□□□□□ -1.79
YLR400WYLR400W YKL133CP36066 463 aa3.89□□□□□ -1.79
YLR400WYLR400W SET3P36124 751 aa3.89□□□□□ -1.79
YLR400WYLR400W EMP65P40085 556 aa3.89□□□□□ -1.79
YLR400WYLR400W NOP9P47077 666 aaKnown RBP3.89□□□□□ -1.79
YLR400WYLR400W SLD3P53135 668 aa3.89□□□□□ -1.79
YLR400WYLR400W ARP4P80428 489 aa3.89□□□□□ -1.79
YLR400WYLR400W LEE1Q02799 301 aaKnown RBP3.89□□□□□ -1.79
YLR400WYLR400W TMA64Q04600 565 aaKnown RBP3.89□□□□□ -1.79
YLR400WYLR400W ECM38Q05902 660 aaPredicted RBP3.89□□□□□ -1.79
YLR400WYLR400W RPN7Q06103 429 aaKnown RBP3.89□□□□□ -1.79
YLR400WYLR400W SWI6P09959 803 aa3.88□□□□□ -1.79
YLR400WYLR400W GMH1P36125 273 aa3.88□□□□□ -1.79
YLR400WYLR400W EXO84P38261 753 aa3.88□□□□□ -1.79
YLR400WYLR400W BEM4P39011 633 aa3.88□□□□□ -1.79
YLR400WYLR400W HIS6P40545 261 aa3.88□□□□□ -1.79
YLR400WYLR400W YJR039WP47107 1121 aa3.88□□□□□ -1.79
YLR400WYLR400W CNM67P53865 581 aaKnown RBP3.88□□□□□ -1.79
YLR400WYLR400W CEG1Q01159 459 aaPredicted RBP3.88□□□□□ -1.79
YLR400WYLR400W YHM2Q04013 314 aa3.88□□□□□ -1.79
YLR400WYLR400W PEX15Q08215 383 aa3.88□□□□□ -1.79
YLR400WYLR400W YPR027CQ12079 277 aa3.88□□□□□ -1.79
YLR400WYLR400W CLF1Q12309 687 aaPredicted RBP3.88□□□□□ -1.79
YLR400WYLR400W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
YLR400WYLR400W RPA135P22138 1203 aaKnown RBP3.87□□□□□ -1.79
YLR400WYLR400W VPS34P22543 875 aa3.87□□□□□ -1.79
YLR400WYLR400W YKU70P32807 602 aa3.87□□□□□ -1.79
YLR400WYLR400W BCS1P32839 456 aa3.87□□□□□ -1.79
YLR400WYLR400W RIM4P38741 713 aa3.87□□□□□ -1.79
YLR400WYLR400W SSZ1P38788 538 aaKnown RBP3.87□□□□□ -1.79
YLR400WYLR400W ACA1P39970 489 aa3.87□□□□□ -1.79
YLR400WYLR400W RPT2P40327 437 aaKnown RBP3.87□□□□□ -1.79
YLR400WYLR400W QRI7P43122 407 aa3.87□□□□□ -1.79
YLR400WYLR400W BRE5P53741 515 aaKnown RBP3.87□□□□□ -1.79
YLR400WYLR400W PTA1Q01329 785 aaPredicted RBP3.87□□□□□ -1.79
YLR400WYLR400W CDC26P14724 124 aa3.86□□□□□ -1.79
YLR400WYLR400W SEC65P29478 273 aa3.86□□□□□ -1.79
YLR400WYLR400W DBF20P32328 564 aa3.86□□□□□ -1.79
YLR400WYLR400W ORC2P32833 620 aa3.86□□□□□ -1.79
YLR400WYLR400W MAL31P38156 614 aa3.86□□□□□ -1.79
YLR400WYLR400W VID27P40157 782 aa3.86□□□□□ -1.79
YLR400WYLR400W YNL195CP40168 261 aa3.86□□□□□ -1.79
YLR400WYLR400W PUS4P48567 403 aaKnown RBP3.86□□□□□ -1.79
YLR400WYLR400W MRK1P50873 501 aa3.86□□□□□ -1.79
YLR400WYLR400W PCL10P53124 433 aa3.86□□□□□ -1.79
YLR400WYLR400W PAP2P53632 584 aaKnown RBP3.86□□□□□ -1.79
YLR400WYLR400W CIA1Q05583 330 aa3.86□□□□□ -1.79
YLR400WYLR400W BRE1Q07457 700 aaKnown RBP3.86□□□□□ -1.79
YLR400WYLR400W PSR2Q07949 397 aa3.86□□□□□ -1.79
YLR400WYLR400W YAP7Q08182 245 aa3.86□□□□□ -1.79
YLR400WYLR400W DIA2Q08496 732 aaPredicted RBP3.86□□□□□ -1.79
YLR400WYLR400W OSW1Q08692 278 aa3.86□□□□□ -1.79
YLR400WYLR400W HOM2P13663 365 aaKnown RBP3.85□□□□□ -1.79
YLR400WYLR400W HOP1P20050 605 aa3.85□□□□□ -1.79
YLR400WYLR400W TMT1P32643 299 aa3.85□□□□□ -1.79
YLR400WYLR400W PTH2P34222 208 aa3.85□□□□□ -1.79
YLR400WYLR400W MUP3P38734 546 aa3.85□□□□□ -1.79
YLR400WYLR400W COX18P53239 316 aa3.85□□□□□ -1.79
YLR400WYLR400W YGR151CP53287 111 aa3.85□□□□□ -1.79
YLR400WYLR400W THI22Q06490 572 aa3.85□□□□□ -1.79
YLR400WYLR400W ECM3Q99252 613 aa3.85□□□□□ -1.79
YLR400WYLR400W PRP28P23394 588 aa3.84□□□□□ -1.79
YLR400WYLR400W MRS6P32864 603 aaKnown RBP3.84□□□□□ -1.79
YLR400WYLR400W AKL1P38080 1108 aaKnown RBP3.84□□□□□ -1.79
YLR400WYLR400W YMC2P38087 329 aa3.84□□□□□ -1.79
YLR400WYLR400W YHR097CP38809 366 aaKnown RBP3.84□□□□□ -1.79
YLR400WYLR400W IES1P43579 692 aa3.84□□□□□ -1.79
YLR400WYLR400W SET2P46995 733 aaKnown RBP3.84□□□□□ -1.79
YLR400WYLR400W GLO1P50107 326 aa3.84□□□□□ -1.79
YLR400WYLR400W YML131WQ03102 365 aa3.84□□□□□ -1.79
YLR400WYLR400W SLK19Q08581 821 aaKnown RBP3.84□□□□□ -1.79
YLR400WYLR400W YOL114CQ12322 202 aa3.84□□□□□ -1.79
YLR400WYLR400W HXT4P32467 576 aa3.83□□□□□ -1.8
YLR400WYLR400W PET309P32522 965 aaPredicted RBP3.83□□□□□ -1.8
YLR400WYLR400W KSP1P38691 1029 aaKnown RBP3.83□□□□□ -1.8
YLR400WYLR400W ERP2P39704 215 aa3.83□□□□□ -1.8
YLR400WYLR400W EAF5P39995 279 aa3.83□□□□□ -1.8
YLR400WYLR400W MIT1P40002 666 aa3.83□□□□□ -1.8
YLR400WYLR400W PIG2P40187 538 aa3.83□□□□□ -1.8
YLR400WYLR400W VID28P40547 921 aa3.83□□□□□ -1.8
YLR400WYLR400W SAP185P40856 1058 aa3.83□□□□□ -1.8
YLR400WYLR400W IRC5P43610 853 aa3.83□□□□□ -1.8
YLR400WYLR400W RNR4P49723 345 aaKnown RBP3.83□□□□□ -1.8
YLR400WYLR400W NOP15P53927 220 aaPredicted RBP3.83□□□□□ -1.8
YLR400WYLR400W RIM13Q03792 727 aa3.83□□□□□ -1.8
YLR400WYLR400W HLR1Q04429 423 aa3.83□□□□□ -1.8
YLR400WYLR400W COG4Q06096 861 aa3.83□□□□□ -1.8
YLR400WYLR400W YDL086WQ07505 273 aa3.83□□□□□ -1.8
YLR400WYLR400W GLN4P13188 809 aaKnown RBP3.82□□□□□ -1.8
YLR400WYLR400W APN2P38207 520 aa3.82□□□□□ -1.8
YLR400WYLR400W ERR3P42222 437 aa3.82□□□□□ -1.8
YLR400WYLR400W SPC98P53540 846 aa3.82□□□□□ -1.8
YLR400WYLR400W MOT3P54785 490 aaKnown RBP3.82□□□□□ -1.8
YLR400WYLR400W TRS130Q03660 1102 aa3.82□□□□□ -1.8
YLR400WYLR400W SEG1Q04279 960 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms