RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	AIM32	Q04689	311 aa		16.23	■□□□□ 0.19
CCC1	YLR220W	KAP95	Q06142	861 aa	Known RBP	16.23	■□□□□ 0.19
CCC1	YLR220W	PIG1	Q06216	648 aa		16.23	■□□□□ 0.19
CCC1	YLR220W	TUB3	P09734	445 aa	Known RBP	16.22	■□□□□ 0.19
CCC1	YLR220W	PMS1	P14242	873 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	PEX1	P24004	1043 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	HSL7	P38274	827 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	REI1	P38344	393 aa	Predicted RBP	16.22	■□□□□ 0.19
CCC1	YLR220W	AVT2	P39981	480 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	ELP3	Q02908	557 aa	Known RBP	16.22	■□□□□ 0.19
CCC1	YLR220W	VPS60	Q03390	229 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	THI20	Q08224	551 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	LCB4	Q12246	624 aa		16.22	■□□□□ 0.19
CCC1	YLR220W	YBR225W	P38321	900 aa		16.21	■□□□□ 0.19
CCC1	YLR220W	YGR283C	P53336	341 aa	Predicted RBP	16.21	■□□□□ 0.19
CCC1	YLR220W	NOG2	P53742	486 aa	Known RBP	16.21	■□□□□ 0.19
CCC1	YLR220W	YNL247W	P53852	767 aa	Known RBP	16.21	■□□□□ 0.19
CCC1	YLR220W	MTG1	Q03151	367 aa	Predicted RBP	16.21	■□□□□ 0.19
CCC1	YLR220W	ECI1	Q05871	280 aa		16.21	■□□□□ 0.19
CCC1	YLR220W	CCP1	P00431	361 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	HMG2	P12684	1045 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	ISF1	P32488	338 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	GCG1	P32656	232 aa	Known RBP	16.2	■□□□□ 0.18
CCC1	YLR220W	MMS21	P38632	267 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	NMD3	P38861	518 aa	Known RBP	16.2	■□□□□ 0.18
CCC1	YLR220W	SSP1	P38871	571 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	END3	P39013	349 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	BTT1	P40314	149 aa	Predicted RBP	16.2	■□□□□ 0.18
CCC1	YLR220W	MAD1	P40957	749 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	CEP3	P40969	608 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	MTD1	Q02046	320 aa	Known RBP	16.2	■□□□□ 0.18
CCC1	YLR220W	YMR187C	Q03236	431 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	FMP25	Q08023	583 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	SAM3	Q08986	587 aa		16.2	■□□□□ 0.18
CCC1	YLR220W	RAD16	P31244	790 aa		16.19	■□□□□ 0.18
CCC1	YLR220W	BYE1	P36106	594 aa		16.19	■□□□□ 0.18
CCC1	YLR220W	RIM4	P38741	713 aa		16.19	■□□□□ 0.18
CCC1	YLR220W	PEX31	P53203	462 aa		16.19	■□□□□ 0.18
CCC1	YLR220W	YNL040W	P53960	456 aa	Predicted RBP	16.19	■□□□□ 0.18
CCC1	YLR220W	THI7	Q05998	598 aa		16.19	■□□□□ 0.18
CCC1	YLR220W	NDJ1	Q12366	352 aa		16.19	■□□□□ 0.18
CCC1	YLR220W	PDE1	P22434	369 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	PCA1	P38360	1216 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	SFB3	P38810	929 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	KHA1	P40309	873 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	ARG2	P40360	574 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	RPC17	P47076	161 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	GCN5	Q03330	439 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	VTI1	Q04338	217 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	TDA9	Q04545	1251 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	THI21	Q08975	551 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	ZRT2	Q12436	422 aa		16.18	■□□□□ 0.18
CCC1	YLR220W	RAD10	P06838	210 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	OYE3	P41816	400 aa	Predicted RBP	16.17	■□□□□ 0.18
CCC1	YLR220W	VTC4	P47075	721 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	RIM8	P53179	542 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	HOS3	Q02959	697 aa	Known RBP	16.17	■□□□□ 0.18
CCC1	YLR220W	PMT7	Q06644	662 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	YDL073W	Q07454	984 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	AIM41	Q12032	185 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	RMP1	Q12530	201 aa		16.17	■□□□□ 0.18
CCC1	YLR220W	MTF1	P14908	341 aa	Known RBP	16.16	■□□□□ 0.18
CCC1	YLR220W	DAL1	P32375	460 aa		16.16	■□□□□ 0.18
CCC1	YLR220W	SAP185	P40856	1058 aa		16.16	■□□□□ 0.18
CCC1	YLR220W	PSP1	P50896	841 aa	Known RBP	16.16	■□□□□ 0.18
CCC1	YLR220W	SPG3	Q04398	127 aa	Predicted RBP	16.16	■□□□□ 0.18
CCC1	YLR220W	BSP1	Q06604	576 aa		16.16	■□□□□ 0.18
CCC1	YLR220W	YPQ1	Q12010	308 aa		16.16	■□□□□ 0.18
CCC1	YLR220W	ARP7	Q12406	477 aa		16.16	■□□□□ 0.18
CCC1	YLR220W	NOP14	Q99207	810 aa	Known RBP	16.16	■□□□□ 0.18
CCC1	YLR220W	APE1	P14904	514 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	HSP78	P33416	811 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	PEX28	P38848	579 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	SAK1	P38990	1142 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	MOB1	P40484	314 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	UTP8	P53276	713 aa	Known RBP	16.15	■□□□□ 0.18
CCC1	YLR220W	KTR6	P54070	446 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	SND1	Q04007	877 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	URH1	Q04179	340 aa		16.15	■□□□□ 0.18
CCC1	YLR220W	COQ8	P27697	501 aa		16.14	■□□□□ 0.17
CCC1	YLR220W	MEI4	P29467	408 aa		16.14	■□□□□ 0.17
CCC1	YLR220W	CNS1	P33313	385 aa		16.14	■□□□□ 0.17
CCC1	YLR220W	CCT4	P39078	528 aa	Known RBP	16.14	■□□□□ 0.17
CCC1	YLR220W	NUP60	P39705	539 aa		16.14	■□□□□ 0.17
CCC1	YLR220W	LSB6	P42951	607 aa		16.14	■□□□□ 0.17
CCC1	YLR220W	YDR018C	Q12185	396 aa		16.14	■□□□□ 0.17
CCC1	YLR220W	RRP1	P35178	278 aa	Predicted RBP	16.13	■□□□□ 0.17
CCC1	YLR220W	ECM13	P38195	257 aa		16.13	■□□□□ 0.17
CCC1	YLR220W	RKM2	Q03942	479 aa		16.13	■□□□□ 0.17
CCC1	YLR220W	IZH4	Q99393	312 aa		16.13	■□□□□ 0.17
CCC1	YLR220W	YCR015C	P25616	317 aa		16.12	■□□□□ 0.17
CCC1	YLR220W	PRM9	P39551	298 aa		16.12	■□□□□ 0.17
CCC1	YLR220W	MRX6	P48564	524 aa		16.12	■□□□□ 0.17
CCC1	YLR220W	YML6	P51998	286 aa		16.12	■□□□□ 0.17
CCC1	YLR220W	AAD4	Q07747	329 aa		16.12	■□□□□ 0.17
CCC1	YLR220W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	16.11	■□□□□ 0.17	not detected
CCC1	YLR220W	YIH1	P25637	258 aa		16.11	■□□□□ 0.17
CCC1	YLR220W	FLC2	P39719	783 aa		16.11	■□□□□ 0.17
CCC1	YLR220W	SLY1	P22213	666 aa		16.1	■□□□□ 0.17
CCC1	YLR220W	PEX34	P25584	144 aa		16.1	■□□□□ 0.17

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms