RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C BRE5P53741 515 aaKnown RBP2.83□□□□□ -1.96
SHE2YKL130C COG8Q04632 607 aa2.83□□□□□ -1.96
SHE2YKL130C ARG7Q04728 441 aa2.83□□□□□ -1.96
SHE2YKL130C VPS36Q06696 566 aa2.83□□□□□ -1.96
SHE2YKL130C GEP3Q08622 556 aa2.83□□□□□ -1.96
SHE2YKL130C POM34Q12445 299 aa2.83□□□□□ -1.96
SHE2YKL130C SRD1P09007 221 aa2.82□□□□□ -1.96
SHE2YKL130C MNN4P36044 1178 aa2.82□□□□□ -1.96
SHE2YKL130C ELF1P36053 145 aa2.82□□□□□ -1.96
SHE2YKL130C TYS1P36421 394 aaKnown RBP2.82□□□□□ -1.96
SHE2YKL130C COS111P38308 924 aa2.82□□□□□ -1.96
SHE2YKL130C MGS1P40151 587 aa2.82□□□□□ -1.96
SHE2YKL130C MEP2P41948 499 aa2.82□□□□□ -1.96
SHE2YKL130C PEX8P53248 589 aa2.82□□□□□ -1.96
SHE2YKL130C YFT2Q06676 274 aa2.82□□□□□ -1.96
SHE2YKL130C IRC3Q06683 689 aa2.82□□□□□ -1.96
SHE2YKL130C TMA7Q3E764 64 aaKnown RBP2.82□□□□□ -1.96
SHE2YKL130C RPS9BP05755 195 aaKnown RBP2.81□□□□□ -1.96
SHE2YKL130C PCL2P25693 308 aa2.81□□□□□ -1.96
SHE2YKL130C MSS1P32559 526 aaPredicted RBP2.81□□□□□ -1.96
SHE2YKL130C RGT1P32862 1170 aa2.81□□□□□ -1.96
SHE2YKL130C PIP2P52960 996 aa2.81□□□□□ -1.96
SHE2YKL130C MET13P53128 600 aa2.81□□□□□ -1.96
SHE2YKL130C GPG1P53130 126 aa2.81□□□□□ -1.96
SHE2YKL130C SNF12P53628 566 aa2.81□□□□□ -1.96
SHE2YKL130C GPD1Q00055 391 aaKnown RBP2.81□□□□□ -1.96
SHE2YKL130C YPL068CQ02749 293 aa2.81□□□□□ -1.96
SHE2YKL130C TRS23Q03784 219 aa2.81□□□□□ -1.96
SHE2YKL130C VHS3Q08438 674 aa2.81□□□□□ -1.96
SHE2YKL130C TRE2Q08693 809 aa2.81□□□□□ -1.96
SHE2YKL130C ATP4P05626 244 aa2.8□□□□□ -1.96
SHE2YKL130C SFL1P20134 766 aa2.8□□□□□ -1.96
SHE2YKL130C KIN82P25341 720 aa2.8□□□□□ -1.96
SHE2YKL130C EUG1P32474 517 aa2.8□□□□□ -1.96
SHE2YKL130C YBR071WP38243 211 aa2.8□□□□□ -1.96
SHE2YKL130C RIM4P38741 713 aa2.8□□□□□ -1.96
SHE2YKL130C YHR202WP38887 602 aa2.8□□□□□ -1.96
SHE2YKL130C GPP1P41277 250 aaKnown RBP2.8□□□□□ -1.96
SHE2YKL130C YGL117WP53133 265 aa2.8□□□□□ -1.96
SHE2YKL130C ATP23P53722 227 aa2.8□□□□□ -1.96
SHE2YKL130C DAK1P54838 584 aaKnown RBP2.8□□□□□ -1.96
SHE2YKL130C VPS72Q03388 795 aa2.8□□□□□ -1.96
SHE2YKL130C MTQ2Q03920 221 aaPredicted RBP2.8□□□□□ -1.96
SHE2YKL130C VMS1Q04311 632 aaKnown RBP2.8□□□□□ -1.96
SHE2YKL130C SLX4Q12098 748 aa2.8□□□□□ -1.96
SHE2YKL130C MRPL9P31334 269 aa2.79□□□□□ -1.96
SHE2YKL130C BEM3P32873 1128 aa2.79□□□□□ -1.96
SHE2YKL130C AKL1P38080 1108 aaKnown RBP2.79□□□□□ -1.96
SHE2YKL130C SSZ1P38788 538 aaKnown RBP2.79□□□□□ -1.96
SHE2YKL130C CKB2P38930 258 aa2.79□□□□□ -1.96
SHE2YKL130C BIT61P47041 543 aa2.79□□□□□ -1.96
SHE2YKL130C YJR120WP47157 116 aa2.79□□□□□ -1.96
SHE2YKL130C AIM14P53109 570 aa2.79□□□□□ -1.96
SHE2YKL130C PEX14P53112 341 aa2.79□□□□□ -1.96
SHE2YKL130C CPR8P53728 308 aa2.79□□□□□ -1.96
SHE2YKL130C GUD1Q07729 489 aa2.79□□□□□ -1.96
SHE2YKL130C IZH3Q07959 543 aa2.79□□□□□ -1.96
SHE2YKL130C YTM1Q12024 460 aaPredicted RBP2.79□□□□□ -1.96
SHE2YKL130C GIN4Q12263 1142 aa2.79□□□□□ -1.96
SHE2YKL130C FRS1P15624 595 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C STE4P18851 423 aa2.78□□□□□ -1.96
SHE2YKL130C PWP2P25635 923 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C DPB3P27344 201 aa2.78□□□□□ -1.96
SHE2YKL130C PRP19P32523 503 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C PCM1P38628 557 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C NAB3P38996 802 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SHE2YKL130C GZF3P42944 551 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C DUG1P43616 481 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C YJR039WP47107 1121 aa2.78□□□□□ -1.96
SHE2YKL130C YJR096WP47137 282 aa2.78□□□□□ -1.96
SHE2YKL130C COG6P53959 839 aa2.78□□□□□ -1.96
SHE2YKL130C CEF1Q03654 590 aaPredicted RBP2.78□□□□□ -1.96
SHE2YKL130C SND1Q04007 877 aa2.78□□□□□ -1.96
SHE2YKL130C VBA4Q04602 768 aaKnown RBP2.78□□□□□ -1.96
SHE2YKL130C YOR378WQ08902 515 aa2.78□□□□□ -1.96
SHE2YKL130C NYV1Q12255 253 aa2.78□□□□□ -1.96
SHE2YKL130C FRE7Q12333 620 aa2.78□□□□□ -1.96
SHE2YKL130C KAR1P11927 433 aa2.77□□□□□ -1.97
SHE2YKL130C HMG1P12683 1054 aa2.77□□□□□ -1.97
SHE2YKL130C AEP2P22136 580 aa2.77□□□□□ -1.97
SHE2YKL130C PET127P32606 800 aa2.77□□□□□ -1.97
SHE2YKL130C SWE1P32944 819 aa2.77□□□□□ -1.97
SHE2YKL130C VPS24P36095 224 aaKnown RBP2.77□□□□□ -1.97
SHE2YKL130C YKR075CP36155 307 aa2.77□□□□□ -1.97
SHE2YKL130C PEA2P40091 420 aa2.77□□□□□ -1.97
SHE2YKL130C THI6P41835 540 aa2.77□□□□□ -1.97
SHE2YKL130C IRC8P47046 822 aa2.77□□□□□ -1.97
SHE2YKL130C ATG33Q06485 197 aa2.77□□□□□ -1.97
SHE2YKL130C HEM1P09950 548 aaPredicted RBP2.76□□□□□ -1.97
SHE2YKL130C TUP1P16649 713 aa2.76□□□□□ -1.97
SHE2YKL130C PLC1P32383 869 aa2.76□□□□□ -1.97
SHE2YKL130C ECM32P32644 1121 aaKnown RBP2.76□□□□□ -1.97
SHE2YKL130C DID4P36108 232 aa2.76□□□□□ -1.97
SHE2YKL130C PIH1P38768 344 aa2.76□□□□□ -1.97
SHE2YKL130C OAF1P39720 1047 aaPredicted RBP2.76□□□□□ -1.97
SHE2YKL130C MNN11P46985 422 aaKnown RBP2.76□□□□□ -1.97
SHE2YKL130C ERG13P54839 491 aaKnown RBP2.76□□□□□ -1.97
SHE2YKL130C DCS2Q12123 353 aa2.76□□□□□ -1.97
SHE2YKL130C PRS5Q12265 496 aaKnown RBP2.76□□□□□ -1.97
SHE2YKL130C ZPS1Q12512 249 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms