RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C AIM32Q04689 311 aa2.27□□□□□ -2.05
UFD4YKL010C DUS4Q06063 367 aa2.27□□□□□ -2.05
UFD4YKL010C APC5Q08683 685 aa2.27□□□□□ -2.05
UFD4YKL010C UBR1P19812 1950 aa2.26□□□□□ -2.05
UFD4YKL010C COX4P04037 155 aa2.26□□□□□ -2.05
UFD4YKL010C SUP45P12385 437 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C SNA3P14359 133 aa2.26□□□□□ -2.05
UFD4YKL010C CBF1P17106 351 aa2.26□□□□□ -2.05
UFD4YKL010C ADE2P21264 571 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C CLB1P24868 471 aa2.26□□□□□ -2.05
UFD4YKL010C MUD1P32605 298 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C YKL050CP35736 922 aa2.26□□□□□ -2.05
UFD4YKL010C MSG5P38590 489 aa2.26□□□□□ -2.05
UFD4YKL010C LIN1P38852 340 aaPredicted RBP2.26□□□□□ -2.05
UFD4YKL010C SSN3P39073 555 aa2.26□□□□□ -2.05
UFD4YKL010C YER156CP40093 338 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C CPR7P47103 393 aa2.26□□□□□ -2.05
UFD4YKL010C TAF6P53040 516 aa2.26□□□□□ -2.05
UFD4YKL010C RTT102P53330 157 aa2.26□□□□□ -2.05
UFD4YKL010C YMR321CQ04898 105 aa2.26□□□□□ -2.05
UFD4YKL010C CUE5Q08412 411 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C OSW1Q08692 278 aa2.26□□□□□ -2.05
UFD4YKL010C TRE1Q08919 783 aa2.26□□□□□ -2.05
UFD4YKL010C APL5Q08951 932 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C WTM2Q12206 467 aa2.26□□□□□ -2.05
UFD4YKL010C YDR461C-AQ2V2P7 80 aa2.26□□□□□ -2.05
UFD4YKL010C SEY1Q99287 776 aa2.26□□□□□ -2.05
UFD4YKL010C TPK1P06244 397 aa2.26□□□□□ -2.05
UFD4YKL010C SIP2P34164 415 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C HES1P35843 434 aa2.26□□□□□ -2.05
UFD4YKL010C KDX1P36005 433 aa2.26□□□□□ -2.05
UFD4YKL010C DUG2P38149 878 aa2.26□□□□□ -2.05
UFD4YKL010C SWC5P38326 303 aa2.26□□□□□ -2.05
UFD4YKL010C HIS2P38635 335 aa2.26□□□□□ -2.05
UFD4YKL010C YEL025CP39991 1188 aa2.26□□□□□ -2.05
UFD4YKL010C SNZ3P43545 298 aa2.26□□□□□ -2.05
UFD4YKL010C SNZ2P53824 298 aa2.26□□□□□ -2.05
UFD4YKL010C YNL247WP53852 767 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C CUZ1P53899 274 aa2.26□□□□□ -2.05
UFD4YKL010C YDL073WQ07454 984 aa2.26□□□□□ -2.05
UFD4YKL010C DIS3Q08162 1001 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C YDR018CQ12185 396 aa2.26□□□□□ -2.05
UFD4YKL010C TY1A-DR3Q12441 440 aa2.26□□□□□ -2.05
UFD4YKL010C STT4P37297 1900 aa2.26□□□□□ -2.05
UFD4YKL010C KRS1P15180 591 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C PHO91P27514 894 aa2.26□□□□□ -2.05
UFD4YKL010C RPC82P32349 654 aa2.26□□□□□ -2.05
UFD4YKL010C YKL023WP36103 277 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C NCL1P38205 684 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C EXO5P38289 585 aa2.26□□□□□ -2.05
UFD4YKL010C YMR124WP39523 943 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C ACA1P39970 489 aa2.26□□□□□ -2.05
UFD4YKL010C IML2P47031 731 aa2.26□□□□□ -2.05
UFD4YKL010C VPS4P52917 437 aa2.26□□□□□ -2.05
UFD4YKL010C MNP1P53163 194 aaPredicted RBP2.26□□□□□ -2.05
UFD4YKL010C YNL146WP53906 100 aa2.26□□□□□ -2.05
UFD4YKL010C MET14Q02196 202 aa2.26□□□□□ -2.05
UFD4YKL010C UTP6Q02354 440 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C SYT1Q06836 1226 aa2.26□□□□□ -2.05
UFD4YKL010C PUS1Q12211 544 aaKnown RBP2.26□□□□□ -2.05
UFD4YKL010C LCB4Q12246 624 aa2.26□□□□□ -2.05
UFD4YKL010C THS1P04801 734 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C GCY1P14065 312 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
UFD4YKL010C MSM1P22438 575 aa2.25□□□□□ -2.05
UFD4YKL010C RRP43P25359 394 aaPredicted RBP2.25□□□□□ -2.05
UFD4YKL010C ICL1P28240 557 aaPredicted RBP2.25□□□□□ -2.05
UFD4YKL010C CYS3P31373 394 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C IRE1P32361 1115 aa2.25□□□□□ -2.05
UFD4YKL010C SMI1P32566 505 aa2.25□□□□□ -2.05
UFD4YKL010C RTG2P32608 588 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C COY1P34237 679 aa2.25□□□□□ -2.05
UFD4YKL010C ABZ1P37254 787 aaPredicted RBP2.25□□□□□ -2.05
UFD4YKL010C MRX3P38172 270 aa2.25□□□□□ -2.05
UFD4YKL010C FUI1P38196 639 aa2.25□□□□□ -2.05
UFD4YKL010C TSC10P38342 320 aa2.25□□□□□ -2.05
UFD4YKL010C RFC3P38629 340 aa2.25□□□□□ -2.05
UFD4YKL010C YHB1P39676 399 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C YMR134WP40207 237 aa2.25□□□□□ -2.05
UFD4YKL010C PFK26P40433 827 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C MKT1P40850 830 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C OSW7P43611 510 aa2.25□□□□□ -2.05
UFD4YKL010C ILM1P47155 203 aa2.25□□□□□ -2.05
UFD4YKL010C DIP5P53388 608 aa2.25□□□□□ -2.05
UFD4YKL010C GRX8Q05926 109 aa2.25□□□□□ -2.05
UFD4YKL010C HFI1Q12060 488 aa2.25□□□□□ -2.05
UFD4YKL010C DED1P06634 604 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C YER152CP10356 443 aa2.25□□□□□ -2.05
UFD4YKL010C KAR4P25583 335 aa2.25□□□□□ -2.05
UFD4YKL010C MCM5P29496 775 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C DBF4P32325 704 aa2.25□□□□□ -2.05
UFD4YKL010C RIM1P32445 135 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C OLA1P38219 394 aaKnown RBP2.25□□□□□ -2.05
UFD4YKL010C VHC1P38329 1120 aa2.25□□□□□ -2.05
UFD4YKL010C MNN1P39106 762 aa2.25□□□□□ -2.05
UFD4YKL010C AZR1P50080 613 aa2.25□□□□□ -2.05
UFD4YKL010C PCL10P53124 433 aa2.25□□□□□ -2.05
UFD4YKL010C OSH6Q02201 448 aa2.25□□□□□ -2.05
UFD4YKL010C YMR027WQ04371 470 aa2.25□□□□□ -2.05
UFD4YKL010C IVY1Q04934 453 aa2.25□□□□□ -2.05
UFD4YKL010C SMD2Q06217 110 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms