RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C DEF1P35732 738 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C STB6P36085 766 aa2.19□□□□□ -2.06
RTT101YJL047C YKR018CP36114 725 aa2.19□□□□□ -2.06
RTT101YJL047C NPR3P38742 1146 aa2.19□□□□□ -2.06
RTT101YJL047C BEM4P39011 633 aa2.19□□□□□ -2.06
RTT101YJL047C PIK1P39104 1066 aa2.19□□□□□ -2.06
RTT101YJL047C TIF4631P39935 952 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C KHA1P40309 873 aa2.19□□□□□ -2.06
RTT101YJL047C EFM4P40516 257 aa2.19□□□□□ -2.06
RTT101YJL047C NAS2P40555 220 aa2.19□□□□□ -2.06
RTT101YJL047C MTC3P53077 123 aa2.19□□□□□ -2.06
RTT101YJL047C YNR068CP53754 272 aa2.19□□□□□ -2.06
RTT101YJL047C CIK1Q01649 594 aa2.19□□□□□ -2.06
RTT101YJL047C OAZ1Q02803 292 aa2.19□□□□□ -2.06
RTT101YJL047C FCP1Q03254 732 aa2.19□□□□□ -2.06
RTT101YJL047C ERB1Q04660 807 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C YPS7Q06325 596 aa2.19□□□□□ -2.06
RTT101YJL047C PHO92Q06390 306 aa2.19□□□□□ -2.06
RTT101YJL047C IWR1Q07532 353 aaPredicted RBP2.19□□□□□ -2.06
RTT101YJL047C YPL260WQ08977 551 aa2.19□□□□□ -2.06
RTT101YJL047C CFT2Q12102 859 aaPredicted RBP2.19□□□□□ -2.06
RTT101YJL047C SFI1Q12369 946 aa2.19□□□□□ -2.06
RTT101YJL047C NOP58Q12499 511 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C DIF1O13577 133 aa2.19□□□□□ -2.06
RTT101YJL047C NOT3P06102 836 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C RIT1P23796 513 aa2.19□□□□□ -2.06
RTT101YJL047C SMI1P32566 505 aa2.19□□□□□ -2.06
RTT101YJL047C SAC6P32599 642 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C FRD1P32614 470 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C MDL2P33311 773 aa2.19□□□□□ -2.06
RTT101YJL047C TEF4P36008 412 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C LAS1P36146 502 aaPredicted RBP2.19□□□□□ -2.06
RTT101YJL047C UGA2P38067 497 aa2.19□□□□□ -2.06
RTT101YJL047C SRO77P38163 1010 aa2.19□□□□□ -2.06
RTT101YJL047C ATG14P38270 344 aa2.19□□□□□ -2.06
RTT101YJL047C RFC1P38630 861 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C SRP68P38687 599 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C SSZ1P38788 538 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C QNS1P38795 714 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C UME6P39001 836 aa2.19□□□□□ -2.06
RTT101YJL047C GDI1P39958 451 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C ARF3P40994 183 aaRIP-Chip data2.19□□□□□ -2.06 RIP-Chip
RTT101YJL047C MNT2P53059 558 aa2.19□□□□□ -2.06
RTT101YJL047C ART5P53244 586 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C NCE103P53615 221 aa2.19□□□□□ -2.06
RTT101YJL047C BSC5P53755 489 aa2.19□□□□□ -2.06
RTT101YJL047C YNR071CP53757 342 aa2.19□□□□□ -2.06
RTT101YJL047C BNI5P53890 448 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C MEC3Q02574 474 aa2.19□□□□□ -2.06
RTT101YJL047C RSF1Q05043 376 aa2.19□□□□□ -2.06
RTT101YJL047C ENT4Q07872 247 aa2.19□□□□□ -2.06
RTT101YJL047C APC5Q08683 685 aa2.19□□□□□ -2.06
RTT101YJL047C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
RTT101YJL047C BMS1Q08965 1183 aaKnown RBP2.19□□□□□ -2.06
RTT101YJL047C ACM1Q08981 209 aa2.19□□□□□ -2.06
RTT101YJL047C TGL5Q12043 749 aa2.19□□□□□ -2.06
RTT101YJL047C GRX6Q12438 231 aa2.19□□□□□ -2.06
RTT101YJL047C RPS17AP02407 136 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C TPK1P06244 397 aa2.18□□□□□ -2.06
RTT101YJL047C MIS1P09440 975 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C RPS17BP14127 136 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C RAD51P25454 400 aa2.18□□□□□ -2.06
RTT101YJL047C DAL80P26343 269 aa2.18□□□□□ -2.06
RTT101YJL047C CAP1P28495 268 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C EFT1P32324 842 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C YKR078WP36158 585 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C ARL1P38116 183 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C SIF2P38262 535 aa2.18□□□□□ -2.06
RTT101YJL047C REI1P38344 393 aaPredicted RBP2.18□□□□□ -2.06
RTT101YJL047C YJR061WP40355 935 aa2.18□□□□□ -2.06
RTT101YJL047C YFL052WP43551 465 aa2.18□□□□□ -2.06
RTT101YJL047C FYV8P46949 817 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C OCA1P50946 238 aaPredicted RBP2.18□□□□□ -2.06
RTT101YJL047C HFM1P51979 1187 aa2.18□□□□□ -2.06
RTT101YJL047C HST1P53685 503 aa2.18□□□□□ -2.06
RTT101YJL047C HDA1P53973 706 aa2.18□□□□□ -2.06
RTT101YJL047C ERV25P54837 211 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C PRO2P54885 456 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C ACS1Q01574 713 aa2.18□□□□□ -2.06
RTT101YJL047C FDC1Q03034 503 aa2.18□□□□□ -2.06
RTT101YJL047C DPB4Q04603 196 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C RSA3Q05942 220 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C YPR172WQ06608 200 aa2.18□□□□□ -2.06
RTT101YJL047C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
RTT101YJL047C ISN1Q99312 450 aa2.18□□□□□ -2.06
RTT101YJL047C AFT1P22149 690 aa2.18□□□□□ -2.06
RTT101YJL047C LCB1P25045 558 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C MRP20P32387 263 aa2.18□□□□□ -2.06
RTT101YJL047C MF(ALPHA)2P32435 120 aa2.18□□□□□ -2.06
RTT101YJL047C RPN2P32565 945 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C UIP5P36137 443 aa2.18□□□□□ -2.06
RTT101YJL047C MRPL16P38064 232 aa2.18□□□□□ -2.06
RTT101YJL047C ADH5P38113 351 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C FLR1P38124 548 aa2.18□□□□□ -2.06
RTT101YJL047C MSC7P38694 644 aa2.18□□□□□ -2.06
RTT101YJL047C YEL057CP39983 233 aa2.18□□□□□ -2.06
RTT101YJL047C BUD16P39988 312 aa2.18□□□□□ -2.06
RTT101YJL047C YIL161WP40449 235 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C PRM2P40534 656 aa2.18□□□□□ -2.06
RTT101YJL047C SHR5P41912 237 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms