RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C ESS1P22696 170 aa3.71□□□□□ -1.81
SSM4YIL030C HEM12P32347 362 aaPredicted RBP3.71□□□□□ -1.81
SSM4YIL030C YPK3P38070 525 aa3.71□□□□□ -1.81
SSM4YIL030C PSY2P40164 858 aa3.71□□□□□ -1.81
SSM4YIL030C YMR134WP40207 237 aa3.71□□□□□ -1.81
SSM4YIL030C TGL3P40308 642 aa3.71□□□□□ -1.81
SSM4YIL030C ATG1P53104 897 aa3.71□□□□□ -1.81
SSM4YIL030C YGL108CP53139 140 aa3.71□□□□□ -1.81
SSM4YIL030C YOL098CQ12496 1037 aa3.71□□□□□ -1.81
SSM4YIL030C BRL1P38770 471 aa3.71□□□□□ -1.82
SSM4YIL030C STL1P39932 569 aa3.71□□□□□ -1.82
SSM4YIL030C YIR042CP40586 236 aa3.71□□□□□ -1.82
SSM4YIL030C ALA1P40825 983 aaKnown RBP3.71□□□□□ -1.82
SSM4YIL030C YFL034WP43564 1073 aa3.71□□□□□ -1.82
SSM4YIL030C YJL055WP47044 245 aa3.71□□□□□ -1.82
SSM4YIL030C LYS4P49367 693 aaPredicted RBP3.71□□□□□ -1.82
SSM4YIL030C NUP84P52891 726 aa3.71□□□□□ -1.82
SSM4YIL030C GND2P53319 492 aa3.71□□□□□ -1.82
SSM4YIL030C UTP6Q02354 440 aaKnown RBP3.71□□□□□ -1.82
SSM4YIL030C ACK1Q07622 623 aaPredicted RBP3.71□□□□□ -1.82
SSM4YIL030C YPL260WQ08977 551 aa3.71□□□□□ -1.82
SSM4YIL030C PCD1Q12524 340 aa3.71□□□□□ -1.82
SSM4YIL030C TY4A-HQ6Q5P6 413 aa3.71□□□□□ -1.82
SSM4YIL030C AEP2P22136 580 aa3.71□□□□□ -1.82
SSM4YIL030C RRP43P25359 394 aaPredicted RBP3.71□□□□□ -1.82
SSM4YIL030C YSC84P32793 468 aa3.71□□□□□ -1.82
SSM4YIL030C NGR1P32831 672 aaKnown RBP3.71□□□□□ -1.82
SSM4YIL030C YKL050CP35736 922 aa3.71□□□□□ -1.82
SSM4YIL030C ENT3P47160 408 aa3.71□□□□□ -1.82
SSM4YIL030C COS6P53344 381 aa3.71□□□□□ -1.82
SSM4YIL030C MET14Q02196 202 aa3.71□□□□□ -1.82
SSM4YIL030C SVL3Q03088 825 aaKnown RBP3.71□□□□□ -1.82
SSM4YIL030C RSM28Q03430 361 aa3.71□□□□□ -1.82
SSM4YIL030C SSQ1Q05931 657 aaPredicted RBP3.71□□□□□ -1.82
SSM4YIL030C ECM3Q99252 613 aa3.71□□□□□ -1.82
SSM4YIL030C STE2D6VTK4 431 aa3.7□□□□□ -1.82
SSM4YIL030C ATR1P13090 542 aa3.7□□□□□ -1.82
SSM4YIL030C PFK1P16861 987 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C FRE1P32791 686 aa3.7□□□□□ -1.82
SSM4YIL030C YKL100CP34248 587 aa3.7□□□□□ -1.82
SSM4YIL030C RIB1P38066 345 aa3.7□□□□□ -1.82
SSM4YIL030C ETR1P38071 380 aa3.7□□□□□ -1.82
SSM4YIL030C FMP23P38231 175 aa3.7□□□□□ -1.82
SSM4YIL030C AST2P39945 430 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C KAP123P40069 1113 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C IRR1P40541 1150 aa3.7□□□□□ -1.82
SSM4YIL030C HOP2P53187 214 aa3.7□□□□□ -1.82
SSM4YIL030C ECM9Q02202 377 aa3.7□□□□□ -1.82
SSM4YIL030C TFB3Q03290 321 aa3.7□□□□□ -1.82
SSM4YIL030C SAM3Q08986 587 aa3.7□□□□□ -1.82
SSM4YIL030C DIP2Q12220 943 aaPredicted RBP3.7□□□□□ -1.82
SSM4YIL030C NSI1Q12457 570 aa3.7□□□□□ -1.82
SSM4YIL030C NKP1Q12493 238 aa3.7□□□□□ -1.82
SSM4YIL030C SAN1P22470 610 aa3.7□□□□□ -1.82
SSM4YIL030C CSM1P25651 190 aa3.7□□□□□ -1.82
SSM4YIL030C RPL8BP29453 256 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C DPH2P32461 534 aa3.7□□□□□ -1.82
SSM4YIL030C CSG2P35206 410 aa3.7□□□□□ -1.82
SSM4YIL030C HIS2P38635 335 aa3.7□□□□□ -1.82
SSM4YIL030C HXT6P39003 570 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C HXT7P39004 570 aa3.7□□□□□ -1.82
SSM4YIL030C MGA2P40578 1113 aa3.7□□□□□ -1.82
SSM4YIL030C PSA1P41940 361 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C GUS1P46655 708 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SSM4YIL030C IML2P47031 731 aa3.7□□□□□ -1.82
SSM4YIL030C RBL2P48606 106 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C RPT4P53549 437 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C BET4Q00618 327 aa3.7□□□□□ -1.82
SSM4YIL030C PEX15Q08215 383 aa3.7□□□□□ -1.82
SSM4YIL030C ERG12P07277 443 aa3.7□□□□□ -1.82
SSM4YIL030C NFT1P0CE68 1218 aa3.7□□□□□ -1.82
SSM4YIL030C PRP4P20053 465 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C KGD1P20967 1014 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C YCL049CP25577 312 aa3.7□□□□□ -1.82
SSM4YIL030C ITR2P30606 609 aa3.7□□□□□ -1.82
SSM4YIL030C VMA6P32366 345 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C YBL036CP38197 257 aa3.7□□□□□ -1.82
SSM4YIL030C DYS1P38791 387 aa3.7□□□□□ -1.82
SSM4YIL030C SPC72P39723 622 aa3.7□□□□□ -1.82
SSM4YIL030C YAT2P40017 923 aa3.7□□□□□ -1.82
SSM4YIL030C RSM26P47141 266 aa3.7□□□□□ -1.82
SSM4YIL030C SPP2Q02521 185 aa3.7□□□□□ -1.82
SSM4YIL030C YKU80Q04437 629 aa3.7□□□□□ -1.82
SSM4YIL030C CDC73Q06697 393 aa3.7□□□□□ -1.82
SSM4YIL030C DIS3Q08162 1001 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C SGT2Q12118 346 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C YLL054CQ12244 843 aa3.7□□□□□ -1.82
SSM4YIL030C CMR1Q12510 522 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C SSA4P22202 642 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C PGM1P33401 570 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C ECM4P36156 370 aa3.7□□□□□ -1.82
SSM4YIL030C CHS6P40955 746 aa3.7□□□□□ -1.82
SSM4YIL030C IMD4P50094 524 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C DSL1P53847 754 aa3.7□□□□□ -1.82
SSM4YIL030C GIR2Q03768 265 aaPredicted RBP3.7□□□□□ -1.82
SSM4YIL030C ESF1Q06344 628 aaKnown RBP3.7□□□□□ -1.82
SSM4YIL030C YOR022CQ12204 715 aa3.7□□□□□ -1.82
SSM4YIL030C GPR1Q12361 961 aa3.7□□□□□ -1.82
SSM4YIL030C NBL1Q3E7Y6 73 aa3.7□□□□□ -1.82
SSM4YIL030C RPN2P32565 945 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms