RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W SEC65P29478 273 aa5.4□□□□□ -1.54
RPN12YFR052W SFA1P32771 386 aa5.4□□□□□ -1.54
RPN12YFR052W XRS2P33301 854 aa5.4□□□□□ -1.54
RPN12YFR052W YBR284WP38150 797 aa5.4□□□□□ -1.54
RPN12YFR052W RKM3P38222 552 aa5.4□□□□□ -1.54
RPN12YFR052W IRC24P40580 263 aa5.4□□□□□ -1.54
RPN12YFR052W MUB1Q03162 620 aa5.4□□□□□ -1.54
RPN12YFR052W PPM1Q04081 328 aa5.4□□□□□ -1.54
RPN12YFR052W YLR297WQ05899 129 aa5.4□□□□□ -1.54
RPN12YFR052W CSR1Q06705 408 aaKnown RBP5.4□□□□□ -1.54
RPN12YFR052W SGO1Q08490 590 aa5.4□□□□□ -1.54
RPN12YFR052W APM4Q99186 491 aa5.4□□□□□ -1.54
RPN12YFR052W TPK1P06244 397 aa5.39□□□□□ -1.55
RPN12YFR052W ATP1P07251 545 aaKnown RBP5.39□□□□□ -1.55
RPN12YFR052W SPE1P08432 466 aa5.39□□□□□ -1.55
RPN12YFR052W DAL2P25335 343 aa5.39□□□□□ -1.55
RPN12YFR052W MSH3P25336 1018 aa5.39□□□□□ -1.55
RPN12YFR052W EFB1P32471 206 aaKnown RBP5.39□□□□□ -1.55
RPN12YFR052W CTM1P38818 585 aa5.39□□□□□ -1.55
RPN12YFR052W SAH1P39954 449 aaKnown RBP5.39□□□□□ -1.55
RPN12YFR052W FYV8P46949 817 aaKnown RBP5.39□□□□□ -1.55
RPN12YFR052W SMC3P47037 1230 aa5.39□□□□□ -1.55
RPN12YFR052W RSC1P53236 928 aa5.39□□□□□ -1.55
RPN12YFR052W RPA49Q01080 415 aaPredicted RBP5.39□□□□□ -1.55
RPN12YFR052W SDH5Q08230 162 aa5.39□□□□□ -1.55
RPN12YFR052W LEA1Q08963 238 aaPredicted RBP5.39□□□□□ -1.55
RPN12YFR052W MNL2Q12205 849 aa5.39□□□□□ -1.55
RPN12YFR052W HRT3Q12347 344 aa5.39□□□□□ -1.55
RPN12YFR052W GIS3Q12418 502 aa5.39□□□□□ -1.55
RPN12YFR052W ECM3Q99252 613 aa5.39□□□□□ -1.55
RPN12YFR052W TUP1P16649 713 aa5.38□□□□□ -1.55
RPN12YFR052W COX11P19516 300 aaKnown RBP5.38□□□□□ -1.55
RPN12YFR052W RNR1P21524 888 aaKnown RBP5.38□□□□□ -1.55
RPN12YFR052W SLA2P33338 968 aa5.38□□□□□ -1.55
RPN12YFR052W NIP100P33420 868 aa5.38□□□□□ -1.55
RPN12YFR052W PEX28P38848 579 aa5.38□□□□□ -1.55
RPN12YFR052W RTT107P38850 1070 aa5.38□□□□□ -1.55
RPN12YFR052W GEM1P39722 662 aa5.38□□□□□ -1.55
RPN12YFR052W KAP123P40069 1113 aaKnown RBP5.38□□□□□ -1.55
RPN12YFR052W MMF1P40185 145 aaKnown RBP5.38□□□□□ -1.55
RPN12YFR052W ASG7P46993 209 aa5.38□□□□□ -1.55
RPN12YFR052W COS5P47187 383 aa5.38□□□□□ -1.55
RPN12YFR052W HFM1P51979 1187 aa5.38□□□□□ -1.55
RPN12YFR052W NOP13P53883 403 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
RPN12YFR052W YNL011CP53980 444 aa5.38□□□□□ -1.55
RPN12YFR052W ADA2Q02336 434 aa5.38□□□□□ -1.55
RPN12YFR052W TIF35Q04067 274 aaKnown RBP5.38□□□□□ -1.55
RPN12YFR052W PRM6Q04705 352 aa5.38□□□□□ -1.55
RPN12YFR052W AI5_BETAQ9ZZX0 354 aa5.38□□□□□ -1.55
RPN12YFR052W GLT1Q12680 2145 aaKnown RBP5.38□□□□□ -1.55
RPN12YFR052W KGD2P19262 463 aaPredicted RBP5.37□□□□□ -1.55
RPN12YFR052W SAT4P25333 603 aaKnown RBP5.37□□□□□ -1.55
RPN12YFR052W VBA3P25594 458 aa5.37□□□□□ -1.55
RPN12YFR052W KIP1P28742 1111 aa5.37□□□□□ -1.55
RPN12YFR052W VPH1P32563 840 aaKnown RBP5.37□□□□□ -1.55
RPN12YFR052W PEP7P32609 515 aa5.37□□□□□ -1.55
RPN12YFR052W FRE1P32791 686 aa5.37□□□□□ -1.55
RPN12YFR052W SMC1P32908 1225 aa5.37□□□□□ -1.55
RPN12YFR052W VBA5P36172 582 aa5.37□□□□□ -1.55
RPN12YFR052W MOB1P40484 314 aa5.37□□□□□ -1.55
RPN12YFR052W TAD1P53065 400 aa5.37□□□□□ -1.55
RPN12YFR052W YGL036WP53185 909 aaPredicted RBP5.37□□□□□ -1.55
RPN12YFR052W SLG1P54867 378 aa5.37□□□□□ -1.55
RPN12YFR052W MZM1Q03429 123 aaPredicted RBP5.37□□□□□ -1.55
RPN12YFR052W TSR1Q07381 788 aaKnown RBP5.37□□□□□ -1.55
RPN12YFR052W FMP25Q08023 583 aa5.37□□□□□ -1.55
RPN12YFR052W APE1P14904 514 aa5.36□□□□□ -1.55
RPN12YFR052W PPZ1P26570 692 aa5.36□□□□□ -1.55
RPN12YFR052W GAC1P28006 793 aa5.36□□□□□ -1.55
RPN12YFR052W NAB2P32505 525 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
RPN12YFR052W TKL2P33315 681 aa5.36□□□□□ -1.55
RPN12YFR052W CSG2P35206 410 aa5.36□□□□□ -1.55
RPN12YFR052W YKR073CP36153 106 aa5.36□□□□□ -1.55
RPN12YFR052W TRZ1P36159 838 aaPredicted RBP5.36□□□□□ -1.55
RPN12YFR052W MRPL10P36520 322 aa5.36□□□□□ -1.55
RPN12YFR052W EFM2P38347 419 aa5.36□□□□□ -1.55
RPN12YFR052W CBR1P38626 284 aaKnown RBP5.36□□□□□ -1.55
RPN12YFR052W YJL045WP47052 634 aa5.36□□□□□ -1.55
RPN12YFR052W YJR054WP47114 497 aa5.36□□□□□ -1.55
RPN12YFR052W DRN1P53255 507 aaKnown RBP5.36□□□□□ -1.55
RPN12YFR052W UME1Q03010 460 aa5.36□□□□□ -1.55
RPN12YFR052W HER2Q03557 464 aa5.36□□□□□ -1.55
RPN12YFR052W GPM2Q12008 311 aa5.36□□□□□ -1.55
RPN12YFR052W RRD2Q12461 358 aa5.36□□□□□ -1.55
RPN12YFR052W UBR1P19812 1950 aa5.35□□□□□ -1.55
RPN12YFR052W TRP3P00937 484 aa5.35□□□□□ -1.55
RPN12YFR052W LRE1P25579 583 aaKnown RBP5.35□□□□□ -1.55
RPN12YFR052W GYP6P32806 458 aa5.35□□□□□ -1.55
RPN12YFR052W COY1P34237 679 aa5.35□□□□□ -1.55
RPN12YFR052W YKL097CP34245 136 aa5.35□□□□□ -1.55
RPN12YFR052W SHE3P38272 425 aaKnown RBP5.35□□□□□ -1.55
RPN12YFR052W SAF1P38352 637 aa5.35□□□□□ -1.55
RPN12YFR052W YEL075CP39972 122 aa5.35□□□□□ -1.55
RPN12YFR052W DSE1P40077 573 aa5.35□□□□□ -1.55
RPN12YFR052W VFA1P40080 203 aa5.35□□□□□ -1.55
RPN12YFR052W RPT2P40327 437 aaKnown RBP5.35□□□□□ -1.55
RPN12YFR052W MMM1P41800 426 aa5.35□□□□□ -1.55
RPN12YFR052W IES1P43579 692 aa5.35□□□□□ -1.55
RPN12YFR052W TAF1P46677 1066 aa5.35□□□□□ -1.55
RPN12YFR052W GPD1Q00055 391 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms