RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EMP47	YFL048C	YGR237C	P50089	785 aa		4.63	□□□□□ -1.67
EMP47	YFL048C	YGR125W	P53273	1036 aa		4.63	□□□□□ -1.67
EMP47	YFL048C	MAL13	P53338	473 aa		4.63	□□□□□ -1.67
EMP47	YFL048C	BOP3	P53958	396 aa		4.63	□□□□□ -1.67
EMP47	YFL048C	EIS1	Q05050	843 aa	Known RBP	4.63	□□□□□ -1.67
EMP47	YFL048C	MMR1	Q06324	491 aa		4.63	□□□□□ -1.67
EMP47	YFL048C	TFC6	Q06339	672 aa		4.63	□□□□□ -1.67
EMP47	YFL048C	YDL124W	Q07551	312 aa	Known RBP	4.63	□□□□□ -1.67
EMP47	YFL048C	RRP6	Q12149	733 aa	Known RBP	4.63	□□□□□ -1.67
EMP47	YFL048C	FBP1	P09201	348 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	MTF2	P10849	440 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	RNA1	P11745	407 aa	Known RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	MSD1	P15179	658 aa	Known RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	PSO2	P30620	661 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	STE14	P32584	239 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	ECM32	P32644	1121 aa	Known RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	TYE7	P33122	291 aa	Predicted RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	RRP1	P35178	278 aa	Predicted RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	DEF1	P35732	738 aa	Known RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	RXT2	P38255	430 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	CTM1	P38818	585 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	FYV8	P46949	817 aa	Known RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	ERG5	P54781	538 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	RPS15	Q01855	142 aa	Known RBP	4.62	□□□□□ -1.67
EMP47	YFL048C	INM2	Q05533	292 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	SFH1	Q06168	426 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	OMS1	Q06668	471 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	VAC14	Q06708	880 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	THI3	Q07471	609 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	PNS1	Q12412	539 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	NBL1	Q3E7Y6	73 aa		4.62	□□□□□ -1.67
EMP47	YFL048C	HIS4	P00815	799 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	MPH2	P0CD99	609 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	SPO12	P17123	173 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	MCM3	P24279	971 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	KAR4	P25583	335 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	YEL043W	P32618	956 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	ANP1	P32629	500 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	RPC25	P35718	212 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	MUD2	P36084	527 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	YKR075C	P36155	307 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	EFM2	P38347	419 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	YHR020W	P38708	688 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	MIP6	P38760	659 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	GGA2	P38817	585 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	SMF1	P38925	575 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	CSM2	P40465	213 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	SHQ1	P40486	507 aa	Predicted RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	PCI8	P40512	444 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	AIM21	P40563	679 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	LYS14	P40971	790 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	MIC19	P43594	170 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	AIP1	P46680	615 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	YKR011C	Q02209	353 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	EBS1	Q03466	884 aa	Known RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	SSL1	Q04673	461 aa	Predicted RBP	4.61	□□□□□ -1.67
EMP47	YFL048C	YLR287C	Q05881	355 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	FLC1	Q08967	793 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	YOR111W	Q99210	232 aa		4.61	□□□□□ -1.67
EMP47	YFL048C	MET6	P05694	767 aa	Known RBP	4.6	□□□□□ -1.67
EMP47	YFL048C	RAD1	P06777	1100 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	SPO11	P23179	398 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	RAD57	P25301	460 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	PAP1	P29468	568 aa	Known RBP	4.6	□□□□□ -1.67
EMP47	YFL048C	MGM1	P32266	881 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	BUD16	P39988	312 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	SDP1	P40479	209 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	YIL108W	P40483	696 aa	Known RBP	4.6	□□□□□ -1.67
EMP47	YFL048C	EFM4	P40516	257 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	DOT5	P40553	215 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	UBP6	P43593	499 aa	Known RBP	4.6	□□□□□ -1.67
EMP47	YFL048C	NIT3	P49954	291 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	HUL5	P53119	910 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	UME1	Q03010	460 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	YLR001C	Q07895	862 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	AIM39	Q08223	395 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	YOL075C	Q08234	1294 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	YPL225W	Q08971	146 aa	Known RBP	4.6	□□□□□ -1.67
EMP47	YFL048C	ENV7	Q12003	364 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	RUD3	Q12234	484 aa	Known RBP	4.6	□□□□□ -1.67
EMP47	YFL048C	NYV1	Q12255	253 aa		4.6	□□□□□ -1.67
EMP47	YFL048C	RPS9A	O13516	197 aa	Known RBP	4.59	□□□□□ -1.67
EMP47	YFL048C	TOP3	P13099	656 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
EMP47	YFL048C	RAD53	P22216	821 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	HIR1	P32479	840 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	RPD3	P32561	433 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	MYO3	P36006	1272 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	BYE1	P36106	594 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	MAL31	P38156	614 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	ERG7	P38604	731 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	BCD1	P38772	366 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	MSS4	P38994	779 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	SUN4	P53616	420 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	IMH1	Q06704	911 aa	Known RBP	4.59	□□□□□ -1.67
EMP47	YFL048C	BDF2	Q07442	638 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	YAP7	Q08182	245 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	SDH5	Q08230	162 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	YPL216W	Q08964	1102 aa		4.59	□□□□□ -1.67
EMP47	YFL048C	CWC2	Q12046	339 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms