RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	THI6	P41835	540 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	YFL064C	P43540	174 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	UBP15	P50101	1230 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	DCP2	P53550	970 aa	Known RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	ESF2	P53743	316 aa	Known RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	TMA20	P89886	181 aa	Predicted RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	MAK10	Q02197	733 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	SLX4	Q12098	748 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	DBP10	Q12389	995 aa	Known RBP	5.2	□□□□□ -1.58
PAL1	YDR348C	YBL111C	Q3E7Y5	667 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	RAD61	Q99359	647 aa		5.2	□□□□□ -1.58
PAL1	YDR348C	TRP2	P00899	507 aa	Known RBP	5.19	□□□□□ -1.58
PAL1	YDR348C	MSS116	P15424	664 aa	Known RBP	5.19	□□□□□ -1.58
PAL1	YDR348C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
PAL1	YDR348C	YBP1	P38315	674 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	YHL008C	P38750	627 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	VMA22	P38784	181 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	UBP5	P39944	805 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	YGL176C	P46945	554 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	RNR4	P49723	345 aa	Known RBP	5.19	□□□□□ -1.58
PAL1	YDR348C	MTO1	P53070	669 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	YBP2	P53169	641 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	YGR054W	P53235	642 aa	Known RBP	5.19	□□□□□ -1.58
PAL1	YDR348C	YMR018W	Q04364	514 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	ADY4	Q05955	493 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	ATG26	Q06321	1198 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	ATG13	Q06628	738 aa		5.19	□□□□□ -1.58
PAL1	YDR348C	HTZ1	Q12692	134 aa	Known RBP	5.19	□□□□□ -1.58
PAL1	YDR348C	THR4	P16120	514 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	CBF1	P17106	351 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	UBA1	P22515	1024 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	MAK31	P23059	88 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	KAP122	P32767	1081 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	GYP6	P32806	458 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	TRM2	P33753	639 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	BLI1	P35727	113 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	MYO3	P36006	1272 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	SLM4	P38247	162 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	VHC1	P38329	1120 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	BSD2	P38356	321 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	TRM5	P38793	499 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	YTA6	P40328	754 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	RIC1	P40395	1056 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	CAB2	P40506	365 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	HXT8	P40886	569 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	LSG1	P53145	640 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	MTG1	Q03151	367 aa	Predicted RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	YML108W	Q03759	105 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	FMN1	Q03778	218 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	RIX7	Q07844	837 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	FOB1	O13329	566 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	PGK1	P00560	416 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	THS1	P04801	734 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	GCN3	P14741	305 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	HEM15	P16622	393 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	MSN1	P22148	382 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
PAL1	YDR348C	PRP45	P28004	379 aa	Predicted RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	ITR2	P30606	609 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	EUG1	P32474	517 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	TFC4	P33339	1025 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	COY1	P34237	679 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	NUP120	P35729	1037 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	OCT1	P35999	772 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	LDH1	P38139	375 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	MUM2	P38236	366 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	RRT2	P38332	387 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	MSG5	P38590	489 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	HIS2	P38635	335 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	DIA4	P38705	446 aa	Predicted RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	DYS1	P38791	387 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	PFK26	P40433	827 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	AIM21	P40563	679 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	DIM1	P41819	318 aa	Known RBP	5.18	□□□□□ -1.58
PAL1	YDR348C	IOC3	P43596	787 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	POL31	P46957	487 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	ESBP6	P53918	673 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	MMT1	Q03218	510 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	YDR476C	Q03362	224 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	ADY3	Q07732	790 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	OXR1	Q08952	273 aa		5.18	□□□□□ -1.58
PAL1	YDR348C	CIT1	P00890	479 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	HEM1	P09950	548 aa	Predicted RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	HSF1	P10961	833 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	ATR1	P13090	542 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	ISY1	P21374	235 aa	Predicted RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	URE2	P23202	354 aa	Known RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	MEF1	P25039	761 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	PRP40	P33203	583 aa	Known RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	HSP78	P33416	811 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	TPO5	P36029	618 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	END3	P39013	349 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	MAM33	P40513	266 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	RGD2	P43556	714 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	VMA10	P48836	114 aa	Known RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	MIG2	P53035	382 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	RPL22B	P56628	122 aa	Known RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	COA4	Q05809	96 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	SMD2	Q06217	110 aa	Known RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	MCM21	Q06675	368 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms