RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SNA3P14359 133 aa2.36□□□□□ -2.03
SSD1YDR293C DBP5P20449 482 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C YCR051WP25631 222 aa2.36□□□□□ -2.03
SSD1YDR293C RPL5P26321 297 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C MTC2P34246 357 aa2.36□□□□□ -2.03
SSD1YDR293C SEG2P34250 1132 aa2.36□□□□□ -2.03
SSD1YDR293C LAS1P36146 502 aaPredicted RBP2.36□□□□□ -2.03
SSD1YDR293C NOP4P37838 685 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C RPN3P40016 523 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C PEA2P40091 420 aa2.36□□□□□ -2.03
SSD1YDR293C CCT7P42943 550 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C VMA10P48836 114 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C YNR040WP53736 256 aa2.36□□□□□ -2.03
SSD1YDR293C BNI4P53858 892 aa2.36□□□□□ -2.03
SSD1YDR293C SRL4Q03085 281 aa2.36□□□□□ -2.03
SSD1YDR293C HMO1Q03973 246 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C EMG1Q06287 252 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C YPR196WQ06595 470 aa2.36□□□□□ -2.03
SSD1YDR293C TAF3Q12297 353 aa2.36□□□□□ -2.03
SSD1YDR293C SPO21Q12411 609 aa2.36□□□□□ -2.03
SSD1YDR293C PAB1P04147 577 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SSD1YDR293C CDC9P04819 755 aa2.35□□□□□ -2.03
SSD1YDR293C PPR1P07272 904 aaPredicted RBP2.35□□□□□ -2.03
SSD1YDR293C YML002WP0CF17 737 aa2.35□□□□□ -2.03
SSD1YDR293C SST2P11972 698 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C SFL1P20134 766 aa2.35□□□□□ -2.03
SSD1YDR293C PRP22P24384 1145 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C ADP1P25371 1049 aa2.35□□□□□ -2.03
SSD1YDR293C MCM4P30665 933 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C DBF4P32325 704 aa2.35□□□□□ -2.03
SSD1YDR293C PLC1P32383 869 aa2.35□□□□□ -2.03
SSD1YDR293C ZUO1P32527 433 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C TFC3P34111 1160 aa2.35□□□□□ -2.03
SSD1YDR293C YBL086CP38177 466 aa2.35□□□□□ -2.03
SSD1YDR293C PSY4P38193 441 aa2.35□□□□□ -2.03
SSD1YDR293C YBL028CP38202 106 aa2.35□□□□□ -2.03
SSD1YDR293C POP4P38336 279 aa2.35□□□□□ -2.03
SSD1YDR293C SPL2P38839 148 aa2.35□□□□□ -2.03
SSD1YDR293C YEL025CP39991 1188 aa2.35□□□□□ -2.03
SSD1YDR293C HIS6P40545 261 aa2.35□□□□□ -2.03
SSD1YDR293C ERR3P42222 437 aa2.35□□□□□ -2.03
SSD1YDR293C SPO74P45819 413 aa2.35□□□□□ -2.03
SSD1YDR293C SCD6P45978 349 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SSD1YDR293C CTK3P46963 296 aaPredicted RBP2.35□□□□□ -2.03
SSD1YDR293C YJR096WP47137 282 aa2.35□□□□□ -2.03
SSD1YDR293C PRP31P49704 494 aaPredicted RBP2.35□□□□□ -2.03
SSD1YDR293C NUT1P53114 1132 aa2.35□□□□□ -2.03
SSD1YDR293C YHM2Q04013 314 aa2.35□□□□□ -2.03
SSD1YDR293C SPE3Q12074 293 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C NCA2Q12374 616 aa2.35□□□□□ -2.03
SSD1YDR293C PGA3Q12746 312 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C HBN1Q96VH4 193 aa2.35□□□□□ -2.03
SSD1YDR293C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03 RIP-Chip
SSD1YDR293C ISY1P21374 235 aaPredicted RBP2.35□□□□□ -2.03
SSD1YDR293C RAD57P25301 460 aa2.35□□□□□ -2.03
SSD1YDR293C ILV6P25605 309 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C TRM2P33753 639 aa2.35□□□□□ -2.03
SSD1YDR293C TVP38P36164 337 aa2.35□□□□□ -2.03
SSD1YDR293C JNM1P36224 373 aa2.35□□□□□ -2.03
SSD1YDR293C RGD1P38339 666 aa2.35□□□□□ -2.03
SSD1YDR293C PCM1P38628 557 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C NDE1P40215 560 aa2.35□□□□□ -2.03
SSD1YDR293C ARG2P40360 574 aa2.35□□□□□ -2.03
SSD1YDR293C MND2P40577 368 aa2.35□□□□□ -2.03
SSD1YDR293C IAH1P41734 238 aa2.35□□□□□ -2.03
SSD1YDR293C VPS4P52917 437 aa2.35□□□□□ -2.03
SSD1YDR293C YGR111WP53265 400 aa2.35□□□□□ -2.03
SSD1YDR293C UTP6Q02354 440 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C CUS1Q02554 436 aaPredicted RBP2.35□□□□□ -2.03
SSD1YDR293C SVL3Q03088 825 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C YMR187CQ03236 431 aa2.35□□□□□ -2.03
SSD1YDR293C SPH1Q06160 661 aa2.35□□□□□ -2.03
SSD1YDR293C SMD2Q06217 110 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C TRE2Q08693 809 aa2.35□□□□□ -2.03
SSD1YDR293C SEC39Q12745 709 aa2.35□□□□□ -2.03
SSD1YDR293C TAL1P15019 335 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C SAM2P19358 384 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C MRPS28P21771 286 aa2.35□□□□□ -2.03
SSD1YDR293C KAR4P25583 335 aa2.35□□□□□ -2.03
SSD1YDR293C PSO2P30620 661 aa2.35□□□□□ -2.03
SSD1YDR293C SPT23P35210 1082 aa2.35□□□□□ -2.03
SSD1YDR293C YKL077WP36081 392 aa2.35□□□□□ -2.03
SSD1YDR293C GIP1P38229 639 aa2.35□□□□□ -2.03
SSD1YDR293C EXO84P38261 753 aa2.35□□□□□ -2.03
SSD1YDR293C YBR259WP38338 688 aa2.35□□□□□ -2.03
SSD1YDR293C SSZ1P38788 538 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C GGA2P38817 585 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C MXR1P40029 184 aa2.35□□□□□ -2.03
SSD1YDR293C SET2P46995 733 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C ARH1P48360 493 aa2.35□□□□□ -2.03
SSD1YDR293C MRX6P48564 524 aa2.35□□□□□ -2.03
SSD1YDR293C HFM1P51979 1187 aa2.35□□□□□ -2.03
SSD1YDR293C TAF6P53040 516 aa2.35□□□□□ -2.03
SSD1YDR293C TIF35Q04067 274 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C ATG17Q06410 417 aa2.35□□□□□ -2.03
SSD1YDR293C MLH2Q07980 695 aa2.35□□□□□ -2.03
SSD1YDR293C MCH5Q08777 521 aa2.35□□□□□ -2.03
SSD1YDR293C EFG1Q3E705 233 aaKnown RBP2.35□□□□□ -2.03
SSD1YDR293C RPP2BP02400 110 aaKnown RBP2.34□□□□□ -2.03
SSD1YDR293C TUF1P02992 437 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms