RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	IMA5	P40884	581 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	NOP9	P47077	666 aa	Known RBP	6.64	□□□□□ -1.35
TRP1	YDR007W	SPT20	P50875	604 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	PEF1	P53238	335 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	CWC22	P53333	577 aa	Known RBP	6.64	□□□□□ -1.35
TRP1	YDR007W	TEX1	P53851	422 aa	Known RBP	6.64	□□□□□ -1.35
TRP1	YDR007W	YDR132C	Q03900	495 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	YMR018W	Q04364	514 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	TRI1	Q05024	226 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	OPY2	Q06810	360 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	HOS1	Q12214	470 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	DBP10	Q12389	995 aa	Known RBP	6.64	□□□□□ -1.35
TRP1	YDR007W	ECM3	Q99252	613 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	BUD4	P47136	1447 aa		6.64	□□□□□ -1.35
TRP1	YDR007W	SEC15	P22224	910 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	KAR4	P25583	335 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	MCM10	P32354	571 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	RMA1	P36001	430 aa	Known RBP	6.63	□□□□□ -1.35
TRP1	YDR007W	SMK1	P41808	388 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	MDR1	P53258	950 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	YNR071C	P53757	342 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	CTK1	Q03957	528 aa	Known RBP	6.63	□□□□□ -1.35
TRP1	YDR007W	YLR224W	Q05947	369 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	NEW1	Q08972	1196 aa	Known RBP	6.63	□□□□□ -1.35
TRP1	YDR007W	POM34	Q12445	299 aa		6.63	□□□□□ -1.35
TRP1	YDR007W	PHO5	P00635	467 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	RPS9B	P05755	195 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	NUC1	P08466	329 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	RNA1	P11745	407 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	GFA1	P14742	717 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	MCM3	P24279	971 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	ERG6	P25087	383 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	RER1	P25560	188 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	PRE4	P30657	266 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	XRS2	P33301	854 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	YLF2	P38746	405 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	NOC2	P39744	710 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	FAF1	P40546	346 aa	Predicted RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	MRPS35	P53292	345 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	MRPL13	Q02204	264 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	ATG11	Q12527	1178 aa		6.62	□□□□□ -1.35
TRP1	YDR007W	HRP1	Q99383	534 aa	Known RBP	6.62	□□□□□ -1.35
TRP1	YDR007W	MYO2	P19524	1574 aa	Known RBP	6.61	□□□□□ -1.35
TRP1	YDR007W	MIS1	P09440	975 aa	Known RBP	6.61	□□□□□ -1.35
TRP1	YDR007W	STT3	P39007	718 aa	Known RBP	6.61	□□□□□ -1.35
TRP1	YDR007W	RAD26	P40352	1085 aa		6.61	□□□□□ -1.35
TRP1	YDR007W	PRM2	P40534	656 aa		6.61	□□□□□ -1.35
TRP1	YDR007W	SPO1	P53541	631 aa		6.61	□□□□□ -1.35
TRP1	YDR007W	CPR6	P53691	371 aa	Known RBP	6.61	□□□□□ -1.35
TRP1	YDR007W	ENT2	Q05785	613 aa		6.61	□□□□□ -1.35
TRP1	YDR007W	RRI2	Q12348	645 aa		6.61	□□□□□ -1.35
TRP1	YDR007W	GLT1	Q12680	2145 aa	Known RBP	6.61	□□□□□ -1.35
TRP1	YDR007W	TRM732	Q03496	1420 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	URA3	P03962	267 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	HMG2	P12684	1045 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	CHS3	P29465	1165 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	MTC7	P32633	139 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	RRN3	P36070	627 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	OMA1	P36163	345 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	PUG1	P40100	303 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	MNT3	P40549	630 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	FKH2	P41813	862 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	TAH11	P47112	604 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	ARC35	P53731	342 aa	Known RBP	6.6	□□□□□ -1.35
TRP1	YDR007W	YOL087C	Q99247	1116 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	ESP1	Q03018	1630 aa		6.6	□□□□□ -1.35
TRP1	YDR007W	RPS13	P05756	151 aa	Known RBP	6.59	□□□□□ -1.35
TRP1	YDR007W	POL3	P15436	1097 aa		6.59	□□□□□ -1.35
TRP1	YDR007W	PEX1	P24004	1043 aa		6.59	□□□□□ -1.35
TRP1	YDR007W	GET2	P40056	285 aa		6.59	□□□□□ -1.35
TRP1	YDR007W	ECL1	P48235	211 aa		6.59	□□□□□ -1.35
TRP1	YDR007W	EIS1	Q05050	843 aa	Known RBP	6.59	□□□□□ -1.35
TRP1	YDR007W	IWR1	Q07532	353 aa	Predicted RBP	6.59	□□□□□ -1.35
TRP1	YDR007W	SIR1	P21691	654 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	CLB4	P24871	460 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	YCL049C	P25577	312 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	KAP123	P40069	1113 aa	Known RBP	6.58	□□□□□ -1.36
TRP1	YDR007W	PSF2	P40359	213 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	MTL1	P53214	551 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	AAD4	Q07747	329 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	AIM41	Q12032	185 aa		6.58	□□□□□ -1.36
TRP1	YDR007W	ATG2	P53855	1592 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	NCP1	P16603	691 aa	Known RBP	6.57	□□□□□ -1.36
TRP1	YDR007W	ARG1	P22768	420 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	SLC1	P33333	303 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	FUN12	P39730	1002 aa	Known RBP	6.57	□□□□□ -1.36
TRP1	YDR007W	TMA108	P40462	946 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	YIR042C	P40586	236 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	MEP3	P53390	489 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	ACS1	Q01574	713 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	YCG1	Q06680	1035 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	CRD1	Q07560	283 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	ENB1	Q08299	606 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	CLF1	Q12309	687 aa	Predicted RBP	6.57	□□□□□ -1.36
TRP1	YDR007W	TAF2	P23255	1407 aa		6.57	□□□□□ -1.36
TRP1	YDR007W	SOD2	P00447	233 aa		6.56	□□□□□ -1.36
TRP1	YDR007W	HSP82	P02829	709 aa	Known RBP	6.56	□□□□□ -1.36
TRP1	YDR007W	TUF1	P02992	437 aa	Known RBP	6.56	□□□□□ -1.36
TRP1	YDR007W	MTF2	P10849	440 aa		6.56	□□□□□ -1.36
TRP1	YDR007W	LAT1	P12695	482 aa	Known RBP	6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 31 ms