RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C TRS130Q03660 1102 aa3.95□□□□□ -1.78
RRP42YDL111C DLT1Q04216 342 aa3.95□□□□□ -1.78
RRP42YDL111C ASM4Q05166 528 aa3.95□□□□□ -1.78
RRP42YDL111C ADY4Q05955 493 aa3.95□□□□□ -1.78
RRP42YDL111C YPS7Q06325 596 aa3.95□□□□□ -1.78
RRP42YDL111C ISA1Q07821 250 aaPredicted RBP3.95□□□□□ -1.78
RRP42YDL111C VHS3Q08438 674 aa3.95□□□□□ -1.78
RRP42YDL111C RRI2Q12348 645 aa3.95□□□□□ -1.78
RRP42YDL111C VPS5Q92331 675 aa3.95□□□□□ -1.78
RRP42YDL111C SSM4P40318 1319 aa3.95□□□□□ -1.78
RRP42YDL111C SEC18P18759 758 aaKnown RBP3.94□□□□□ -1.78
RRP42YDL111C RPA135P22138 1203 aaKnown RBP3.94□□□□□ -1.78
RRP42YDL111C XRS2P33301 854 aa3.94□□□□□ -1.78
RRP42YDL111C PSY4P38193 441 aa3.94□□□□□ -1.78
RRP42YDL111C YLF2P38746 405 aa3.94□□□□□ -1.78
RRP42YDL111C PXA1P41909 870 aa3.94□□□□□ -1.78
RRP42YDL111C LGE1Q02796 332 aaKnown RBP3.94□□□□□ -1.78
RRP42YDL111C HMO1Q03973 246 aaKnown RBP3.94□□□□□ -1.78
RRP42YDL111C EIS1Q05050 843 aaKnown RBP3.94□□□□□ -1.78
RRP42YDL111C CIA1Q05583 330 aa3.94□□□□□ -1.78
RRP42YDL111C HIM1Q06674 414 aa3.94□□□□□ -1.78
RRP42YDL111C STP4Q07351 490 aa3.94□□□□□ -1.78
RRP42YDL111C SSP2Q08646 371 aa3.94□□□□□ -1.78
RRP42YDL111C NEW1Q08972 1196 aaKnown RBP3.94□□□□□ -1.78
RRP42YDL111C VAS1P07806 1104 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C CAF20P12962 161 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C FRS1P15624 595 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C IME1P21190 360 aa3.93□□□□□ -1.78
RRP42YDL111C ADE2P21264 571 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C PRP22P24384 1145 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C MFT1P33441 392 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C APM3P38153 483 aa3.93□□□□□ -1.78
RRP42YDL111C RPP1P38786 293 aa3.93□□□□□ -1.78
RRP42YDL111C PPE1P38796 400 aa3.93□□□□□ -1.78
RRP42YDL111C CCT3P39077 534 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C SWD1P39706 426 aa3.93□□□□□ -1.78
RRP42YDL111C SCS2P40075 244 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C RAD26P40352 1085 aa3.93□□□□□ -1.78
RRP42YDL111C FKH2P41813 862 aa3.93□□□□□ -1.78
RRP42YDL111C TAF4P50105 388 aa3.93□□□□□ -1.78
RRP42YDL111C MUP1P50276 574 aa3.93□□□□□ -1.78
RRP42YDL111C MOT3P54785 490 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C GTR1Q00582 310 aa3.93□□□□□ -1.78
RRP42YDL111C VBA4Q04602 768 aaKnown RBP3.93□□□□□ -1.78
RRP42YDL111C TRI1Q05024 226 aa3.93□□□□□ -1.78
RRP42YDL111C ERG20P08524 352 aaKnown RBP3.92□□□□□ -1.78
RRP42YDL111C ADH4P10127 382 aa3.92□□□□□ -1.78
RRP42YDL111C GFD2P25370 566 aaKnown RBP3.92□□□□□ -1.78
RRP42YDL111C RER1P25560 188 aa3.92□□□□□ -1.78
RRP42YDL111C CWH43P25618 953 aa3.92□□□□□ -1.78
RRP42YDL111C BEM3P32873 1128 aa3.92□□□□□ -1.78
RRP42YDL111C YPT7P32939 208 aa3.92□□□□□ -1.78
RRP42YDL111C YHL017WP38745 532 aa3.92□□□□□ -1.78
RRP42YDL111C SDS3P40505 327 aa3.92□□□□□ -1.78
RRP42YDL111C MAD2P40958 196 aa3.92□□□□□ -1.78
RRP42YDL111C SNM1P40993 198 aa3.92□□□□□ -1.78
RRP42YDL111C ERR3P42222 437 aa3.92□□□□□ -1.78
RRP42YDL111C MNT2P53059 558 aa3.92□□□□□ -1.78
RRP42YDL111C PEF1P53238 335 aa3.92□□□□□ -1.78
RRP42YDL111C MRPS35P53292 345 aa3.92□□□□□ -1.78
RRP42YDL111C CPR6P53691 371 aaKnown RBP3.92□□□□□ -1.78
RRP42YDL111C HBT1Q07653 1046 aaKnown RBP3.92□□□□□ -1.78
RRP42YDL111C SGO1Q08490 590 aa3.92□□□□□ -1.78
RRP42YDL111C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RRP42YDL111C ATG11Q12527 1178 aa3.92□□□□□ -1.78
RRP42YDL111C RTP1Q12751 981 aa3.92□□□□□ -1.78
RRP42YDL111C MTF2P10849 440 aa3.91□□□□□ -1.78
RRP42YDL111C GFA1P14742 717 aaKnown RBP3.91□□□□□ -1.78
RRP42YDL111C CBP3P21560 335 aa3.91□□□□□ -1.78
RRP42YDL111C YHR112CP38716 378 aa3.91□□□□□ -1.78
RRP42YDL111C SPC72P39723 622 aa3.91□□□□□ -1.78
RRP42YDL111C BUD8P41698 603 aa3.91□□□□□ -1.78
RRP42YDL111C BIT61P47041 543 aa3.91□□□□□ -1.78
RRP42YDL111C MAD3P47074 515 aa3.91□□□□□ -1.78
RRP42YDL111C YRB30P53107 440 aaPredicted RBP3.91□□□□□ -1.78
RRP42YDL111C ESF2P53743 316 aaKnown RBP3.91□□□□□ -1.78
RRP42YDL111C RCR2Q03446 210 aaKnown RBP3.91□□□□□ -1.78
RRP42YDL111C YMR018WQ04364 514 aa3.91□□□□□ -1.78
RRP42YDL111C DIN7Q12086 430 aa3.91□□□□□ -1.78
RRP42YDL111C RTK1Q12100 620 aaPredicted RBP3.91□□□□□ -1.78
RRP42YDL111C NDJ1Q12366 352 aa3.91□□□□□ -1.78
RRP42YDL111C PHO5P00635 467 aa3.9□□□□□ -1.79
RRP42YDL111C TUF1P02992 437 aaKnown RBP3.9□□□□□ -1.79
RRP42YDL111C MIS1P09440 975 aaKnown RBP3.9□□□□□ -1.79
RRP42YDL111C KIN82P25341 720 aa3.9□□□□□ -1.79
RRP42YDL111C YCL049CP25577 312 aa3.9□□□□□ -1.79
RRP42YDL111C CHS3P29465 1165 aa3.9□□□□□ -1.79
RRP42YDL111C MCM10P32354 571 aa3.9□□□□□ -1.79
RRP42YDL111C RRN3P36070 627 aa3.9□□□□□ -1.79
RRP42YDL111C YBR053CP38235 358 aa3.9□□□□□ -1.79
RRP42YDL111C YHR033WP38690 423 aa3.9□□□□□ -1.79
RRP42YDL111C STT3P39007 718 aaKnown RBP3.9□□□□□ -1.79
RRP42YDL111C KAP123P40069 1113 aaKnown RBP3.9□□□□□ -1.79
RRP42YDL111C FAF1P40546 346 aaPredicted RBP3.9□□□□□ -1.79
RRP42YDL111C MNT3P40549 630 aa3.9□□□□□ -1.79
RRP42YDL111C IMA5P40884 581 aa3.9□□□□□ -1.79
RRP42YDL111C SMK1P41808 388 aa3.9□□□□□ -1.79
RRP42YDL111C SPO1P53541 631 aa3.9□□□□□ -1.79
RRP42YDL111C YNR071CP53757 342 aa3.9□□□□□ -1.79
RRP42YDL111C SQS1P53866 767 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms