RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP11, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP11	YDL043C	CDC6	P09119	513 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	CBP3	P21560	335 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	OPI1	P21957	404 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	EMC1	P25574	760 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	RPL5	P26321	297 aa	Known RBP	4.27	□□□□□ -1.73
PRP11	YDL043C	XRS2	P33301	854 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	MPE1	P35728	441 aa	Known RBP	4.27	□□□□□ -1.73
PRP11	YDL043C	YHR033W	P38690	423 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	YHR112C	P38716	378 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	PPE1	P38796	400 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	IMA5	P40884	581 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	BUD8	P41698	603 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	PXA1	P41909	870 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	CPR6	P53691	371 aa	Known RBP	4.27	□□□□□ -1.73
PRP11	YDL043C	SLU7	Q02775	382 aa	Known RBP	4.27	□□□□□ -1.73
PRP11	YDL043C	PPN1	Q04119	674 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	EIS1	Q05050	843 aa	Known RBP	4.27	□□□□□ -1.73
PRP11	YDL043C	DUS4	Q06063	367 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	GGA1	Q06336	557 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	VPS36	Q06696	566 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	APC5	Q08683	685 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	GPB1	Q08886	897 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	RUD3	Q12234	484 aa	Known RBP	4.27	□□□□□ -1.73
PRP11	YDL043C	ERP4	Q12450	207 aa		4.27	□□□□□ -1.73
PRP11	YDL043C	RER1	P25560	188 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	EFB1	P32471	206 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	RRN3	P36070	627 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	YKR073C	P36153	106 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	YLF2	P38746	405 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	STT3	P39007	718 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	MEF2	P39677	819 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	RAD26	P40352	1085 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	MNT3	P40549	630 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	BIT61	P47041	543 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	PEF1	P53238	335 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	COX18	P53239	316 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	ARC35	P53731	342 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	YNR071C	P53757	342 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	DSL1	P53847	754 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	RRB1	Q04225	511 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	VBA4	Q04602	768 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	TRI1	Q05024	226 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	PEX19	Q07418	342 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	NOP12	Q08208	459 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	MCH5	Q08777	521 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	DBP10	Q12389	995 aa	Known RBP	4.26	□□□□□ -1.73
PRP11	YDL043C	CEX1	Q12453	761 aa		4.26	□□□□□ -1.73
PRP11	YDL043C	SUP35	P05453	685 aa	Known RBP	4.25	□□□□□ -1.73
PRP11	YDL043C	ERG20	P08524	352 aa	Known RBP	4.25	□□□□□ -1.73
PRP11	YDL043C	MTF2	P10849	440 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	MCM3	P24279	971 aa	Known RBP	4.25	□□□□□ -1.73
PRP11	YDL043C	PRP22	P24384	1145 aa	Known RBP	4.25	□□□□□ -1.73
PRP11	YDL043C	YCL049C	P25577	312 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	CWH43	P25618	953 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	CHS3	P29465	1165 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	MTC7	P32633	139 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	NFU1	P32860	256 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	TOS1	P38288	455 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	YNL195C	P40168	261 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	DSN1	P40568	576 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	SMK1	P41808	388 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	OCA1	P50946	238 aa	Predicted RBP	4.25	□□□□□ -1.73
PRP11	YDL043C	MEP3	P53390	489 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	NRG1	Q03125	231 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	YMR018W	Q04364	514 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	RXT3	Q07458	294 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	YOR389W	Q08912	624 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	YDR056C	Q12025	205 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	LSP1	Q12230	341 aa	Known RBP	4.25	□□□□□ -1.73
PRP11	YDL043C	NPC2	Q12408	173 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	TRM11	Q12463	433 aa		4.25	□□□□□ -1.73
PRP11	YDL043C	PHO5	P00635	467 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	HMG2	P12684	1045 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	NCP1	P16603	691 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	RNR1	P21524	888 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	PRE4	P30657	266 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	ELM1	P32801	640 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	SAS3	P34218	831 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	RMA1	P36001	430 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	RPP1	P38786	293 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	CCT3	P39077	534 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	PUG1	P40100	303 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	PRM2	P40534	656 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	NOP9	P47077	666 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	BTN2	P53286	410 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	SPO1	P53541	631 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	TEX1	P53851	422 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	SQS1	P53866	767 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	CTF4	Q01454	927 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	MDM1	Q01846	1127 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	MRPL13	Q02204	264 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	GCN5	Q03330	439 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	RRP9	Q06506	573 aa	Known RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	ACK1	Q07622	623 aa	Predicted RBP	4.24	□□□□□ -1.73
PRP11	YDL043C	RTP1	Q12751	981 aa		4.24	□□□□□ -1.73
PRP11	YDL043C	URA3	P03962	267 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	NUC1	P08466	329 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	MIS1	P09440	975 aa	Known RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	THR4	P16120	514 aa	Known RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	SIR1	P21691	654 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms