RNA–Protein interactions for RNA: YCR085W

YCR085W, Transcript of Dubious open reading frame, yeast

Gene YCR085W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR085W	YCR085W	ADY4	Q05955	493 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	FRE5	Q08908	694 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	CCH1	P50077	2039 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	ACC1	Q00955	2233 aa	Known RBP	4.62	□□□□□ -1.67
YCR085W	YCR085W	MAS2	P11914	482 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	URA1	P28272	314 aa	Predicted RBP	4.62	□□□□□ -1.67
YCR085W	YCR085W	SYN8	P31377	255 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	STE5	P32917	917 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	YHL017W	P38745	532 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	ELO3	P40319	345 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	YIL108W	P40483	696 aa	Known RBP	4.62	□□□□□ -1.67
YCR085W	YCR085W	SDS3	P40505	327 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	HUL4	P40985	892 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	PFD1	P46988	109 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	DLT1	Q04216	342 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	CSI1	Q04368	295 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	SPH1	Q06160	661 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	YDL144C	Q07589	356 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
YCR085W	YCR085W	SWM1	Q12379	170 aa		4.62	□□□□□ -1.67
YCR085W	YCR085W	RPL40A	P0CH08	128 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	RPL40B	P0CH09	128 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	SNA3	P14359	133 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	POL3	P15436	1097 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	TKL1	P23254	680 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	RPD3	P32561	433 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	REC104	P33323	182 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	MCR1	P36060	302 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	CUE2	P36075	443 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	REG2	P38232	338 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	ALD5	P40047	520 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	GND2	P53319	492 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	HBT1	Q07653	1046 aa	Known RBP	4.61	□□□□□ -1.67
YCR085W	YCR085W	ATG11	Q12527	1178 aa		4.61	□□□□□ -1.67
YCR085W	YCR085W	PRI2	P20457	528 aa		4.6	□□□□□ -1.67
YCR085W	YCR085W	YHR078W	P38799	552 aa		4.6	□□□□□ -1.67
YCR085W	YCR085W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YCR085W	YCR085W	UTP8	P53276	713 aa	Known RBP	4.6	□□□□□ -1.67
YCR085W	YCR085W	ASI2	P53895	289 aa		4.6	□□□□□ -1.67
YCR085W	YCR085W	PNG1	Q02890	363 aa		4.6	□□□□□ -1.67
YCR085W	YCR085W	GUD1	Q07729	489 aa		4.6	□□□□□ -1.67
YCR085W	YCR085W	NDJ1	Q12366	352 aa		4.6	□□□□□ -1.67
YCR085W	YCR085W	RPS19A	P07280	144 aa	Known RBP	4.59	□□□□□ -1.67
YCR085W	YCR085W	RPS19B	P07281	144 aa	Predicted RBP	4.59	□□□□□ -1.67
YCR085W	YCR085W	PRP4	P20053	465 aa	Known RBP	4.59	□□□□□ -1.67
YCR085W	YCR085W	RFA1	P22336	621 aa	Known RBP	4.59	□□□□□ -1.67
YCR085W	YCR085W	RIF1	P29539	1916 aa		4.59	□□□□□ -1.67
YCR085W	YCR085W	SPC42	P36094	363 aa		4.59	□□□□□ -1.67
YCR085W	YCR085W	STB5	P38699	743 aa		4.59	□□□□□ -1.67
YCR085W	YCR085W	VID27	P40157	782 aa		4.59	□□□□□ -1.67
YCR085W	YCR085W	FAF1	P40546	346 aa	Predicted RBP	4.59	□□□□□ -1.67
YCR085W	YCR085W	JIP5	Q06214	492 aa	Predicted RBP	4.59	□□□□□ -1.67
YCR085W	YCR085W	PRC1	P00729	532 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	MPH2	P0CD99	609 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	CDC11	P32458	415 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	PPS1	P38148	807 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	YBR053C	P38235	358 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	RPP1	P38786	293 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	OPT1	P40897	799 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	RPS7B	P48164	190 aa	Known RBP	4.58	□□□□□ -1.68
YCR085W	YCR085W	CTR1	P49573	406 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	SKY1	Q03656	742 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	YMR206W	Q03695	313 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	ECM16	Q04217	1267 aa	Known RBP	4.58	□□□□□ -1.68
YCR085W	YCR085W	FMP25	Q08023	583 aa		4.58	□□□□□ -1.68
YCR085W	YCR085W	BEM2	P39960	2167 aa	Known RBP	4.57	□□□□□ -1.68
YCR085W	YCR085W	MBR1	P23493	339 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	IMG2	P25642	146 aa	Predicted RBP	4.57	□□□□□ -1.68
YCR085W	YCR085W	FUB1	P25659	250 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	PET10	P36139	283 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	KTR3	P38130	404 aa	Predicted RBP	4.57	□□□□□ -1.68
YCR085W	YCR085W	YBR184W	P38299	523 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	FPR3	P38911	411 aa	Known RBP	4.57	□□□□□ -1.68
YCR085W	YCR085W	YMR147W	P40218	223 aa	Known RBP	4.57	□□□□□ -1.68
YCR085W	YCR085W	IRC8	P47046	822 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	AMA1	P50082	593 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	MRPS35	P53292	345 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	TDA5	Q06417	326 aa	Known RBP	4.57	□□□□□ -1.68
YCR085W	YCR085W	ENV7	Q12003	364 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	IRA1	P18963	3092 aa		4.57	□□□□□ -1.68
YCR085W	YCR085W	MSD1	P15179	658 aa	Known RBP	4.56	□□□□□ -1.68
YCR085W	YCR085W	RTS1	P38903	757 aa		4.56	□□□□□ -1.68
YCR085W	YCR085W	VPS8	P39702	1274 aa		4.56	□□□□□ -1.68
YCR085W	YCR085W	MUP1	P50276	574 aa		4.56	□□□□□ -1.68
YCR085W	YCR085W	SGO1	Q08490	590 aa		4.56	□□□□□ -1.68
YCR085W	YCR085W	RAD61	Q99359	647 aa		4.56	□□□□□ -1.68
YCR085W	YCR085W	YLR422W	Q06409	1932 aa		4.56	□□□□□ -1.68
YCR085W	YCR085W	BET2	P20133	325 aa		4.55	□□□□□ -1.68
YCR085W	YCR085W	PRO3	P32263	286 aa	Known RBP	4.55	□□□□□ -1.68
YCR085W	YCR085W	VAC8	P39968	578 aa		4.55	□□□□□ -1.68
YCR085W	YCR085W	CEP3	P40969	608 aa		4.55	□□□□□ -1.68
YCR085W	YCR085W	NOG2	P53742	486 aa	Known RBP	4.55	□□□□□ -1.68
YCR085W	YCR085W	MRD1	Q06106	887 aa	Known RBP	4.55	□□□□□ -1.68
YCR085W	YCR085W	PIG1	Q06216	648 aa		4.55	□□□□□ -1.68
YCR085W	YCR085W	MMR1	Q06324	491 aa		4.55	□□□□□ -1.68
YCR085W	YCR085W	SUE1	Q06524	206 aa		4.55	□□□□□ -1.68
YCR085W	YCR085W	MRH1	Q12117	320 aa	Predicted RBP	4.55	□□□□□ -1.68
YCR085W	YCR085W	GCN1	P33892	2672 aa	Known RBP	4.55	□□□□□ -1.68
YCR085W	YCR085W	DAL5	P15365	543 aa		4.54	□□□□□ -1.68
YCR085W	YCR085W	ARP1	P38696	384 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms