RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	AAD3	P25612	363 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	DBP7	P36120	742 aa	Known RBP	5.08	□□□□□ -1.6
ROT2	YBR229C	VID24	P38263	362 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	GVP36	P40531	326 aa	Known RBP	5.08	□□□□□ -1.6
ROT2	YBR229C	ALY2	P47029	1046 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	USE1	P53146	245 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	YGL036W	P53185	909 aa	Predicted RBP	5.08	□□□□□ -1.6
ROT2	YBR229C	BIO4	P53630	237 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	CDC55	Q00362	526 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	YET3	Q07451	203 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	GAL10	P04397	699 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	SNA3	P14359	133 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	MRM1	P25270	412 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	CDC20	P26309	610 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	MEI4	P29467	408 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	SEC1	P30619	724 aa	Known RBP	5.08	□□□□□ -1.6
ROT2	YBR229C	SEC6	P32844	805 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	MND1	P53102	219 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	NUT1	P53114	1132 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	MNP1	P53163	194 aa	Predicted RBP	5.08	□□□□□ -1.6
ROT2	YBR229C	COS6	P53344	381 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	RCF2	P53721	224 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	NOP15	P53927	220 aa	Predicted RBP	5.08	□□□□□ -1.6
ROT2	YBR229C	OSH6	Q02201	448 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	ATP25	Q03153	612 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	AIM39	Q08223	395 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	TRM11	Q12463	433 aa		5.08	□□□□□ -1.6
ROT2	YBR229C	HEM3	P28789	327 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	JJJ3	P47138	172 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	SLD5	Q03406	294 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	HMO1	Q03973	246 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	BUD22	Q04347	519 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	SHS1	Q07657	551 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	GPI13	Q07830	1017 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
ROT2	YBR229C	CUE5	Q08412	411 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	HFI1	Q12060	488 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	TEF1	P02994	458 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	RTG2	P32608	588 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	IXR1	P33417	597 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	NOP4	P37838	685 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	SLI15	P38283	698 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	CKB2	P38930	258 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	STN1	P38960	494 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	RLP7	P40693	322 aa	Known RBP	5.07	□□□□□ -1.6
ROT2	YBR229C	TAH11	P47112	604 aa		5.07	□□□□□ -1.6
ROT2	YBR229C	YPK1	P12688	680 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	NPP1	P25353	742 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	YCR015C	P25616	317 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	RPL5	P26321	297 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
ROT2	YBR229C	AVT3	P36062	692 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	TSC10	P38342	320 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	GUA1	P38625	525 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	YIL054W	P40524	105 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	PEX29	Q03370	554 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	YMR321C	Q04898	105 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	SNX3	Q08826	162 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	TAF3	Q12297	353 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	GPA2	P10823	449 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	PKC1	P24583	1151 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	SKG6	P32900	734 aa	Predicted RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	SUM1	P46676	1062 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	NET1	P47035	1189 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	RNR4	P49723	345 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	YNL058C	P53947	316 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	BET4	Q00618	327 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	ADY3	Q07732	790 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	YIG1	Q08956	461 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	YRR1	Q12172	810 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	YLL056C	Q12177	298 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	YLL058W	Q12198	575 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	SIP2	P34164	415 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	CUE2	P36075	443 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	YBL036C	P38197	257 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	DIA4	P38705	446 aa	Predicted RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	YHL008C	P38750	627 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	FRT2	P39734	528 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	SSP120	P39931	234 aa	Known RBP	5.06	□□□□□ -1.6
ROT2	YBR229C	MND2	P40577	368 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	ACL4	Q03771	387 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	VPS5	Q92331	675 aa		5.06	□□□□□ -1.6
ROT2	YBR229C	RPL24A	P04449	155 aa	Known RBP	5.05	□□□□□ -1.6
ROT2	YBR229C	AMS1	P22855	1083 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	NUP120	P35729	1037 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	RIM2	P38127	377 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	YHR054C	P38780	354 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	RSC30	P38781	883 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	SAD1	P43589	448 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	ARC1	P46672	376 aa	Known RBP	5.05	□□□□□ -1.6
ROT2	YBR229C	FMP33	P46998	180 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	RPS7B	P48164	190 aa	Known RBP	5.05	□□□□□ -1.6
ROT2	YBR229C	PSP2	P50109	593 aa	Known RBP	5.05	□□□□□ -1.6
ROT2	YBR229C	MCM6	P53091	1017 aa	Known RBP	5.05	□□□□□ -1.6
ROT2	YBR229C	MRM2	P53123	320 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	YPR003C	P53394	754 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	SQS1	P53866	767 aa	Known RBP	5.05	□□□□□ -1.6
ROT2	YBR229C	ARO80	Q04052	950 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	YLR455W	Q06188	304 aa		5.05	□□□□□ -1.6
ROT2	YBR229C	EMP46	Q12396	444 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms