RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	ADH4	P10127	382 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	PLB1	P39105	664 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	RPT2	P40327	437 aa	Known RBP	4.93	□□□□□ -1.62
SHE3	YBR130C	AMA1	P50082	593 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	MNT2	P53059	558 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	TRS130	Q03660	1102 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	GIS1	Q03833	894 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	ARA2	Q04212	335 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	RRI2	Q12348	645 aa		4.93	□□□□□ -1.62
SHE3	YBR130C	PCK1	P10963	549 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	SEC12	P11655	471 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	HSC82	P15108	705 aa	Known RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	PRP4	P20053	465 aa	Known RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	IME1	P21190	360 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	STE11	P23561	717 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	MCM3	P24279	971 aa	Known RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	BEM3	P32873	1128 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	RRN3	P36070	627 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	UME6	P39001	836 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	ERR3	P42222	437 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	UBA2	P52488	636 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	CPR6	P53691	371 aa	Known RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	TEX1	P53851	422 aa	Known RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	ENT2	Q05785	613 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	VPS36	Q06696	566 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	CRD1	Q07560	283 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	ENB1	Q08299	606 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	TGL5	Q12043	749 aa		4.92	□□□□□ -1.62
SHE3	YBR130C	CLF1	Q12309	687 aa	Predicted RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	DBP10	Q12389	995 aa	Known RBP	4.92	□□□□□ -1.62
SHE3	YBR130C	MET3	P08536	511 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	HMG2	P12684	1045 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SHE3	YBR130C	RPA135	P22138	1203 aa	Known RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	KAR4	P25583	335 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	MCM10	P32354	571 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	SLC1	P33333	303 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	JNM1	P36224	373 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	PSF2	P40359	213 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	PRM2	P40534	656 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	MNT3	P40549	630 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	YIR042C	P40586	236 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	MAD2	P40958	196 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	NOP9	P47077	666 aa	Known RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	TAH11	P47112	604 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	SAP4	P53036	818 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	ESF2	P53743	316 aa	Known RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	MOT3	P54785	490 aa	Known RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	RCR2	Q03446	210 aa	Known RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	TMA10	Q06177	86 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	IWR1	Q07532	353 aa	Predicted RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	RTK1	Q12100	620 aa	Predicted RBP	4.91	□□□□□ -1.62
SHE3	YBR130C	ECM3	Q99252	613 aa		4.91	□□□□□ -1.62
SHE3	YBR130C	POL3	P15436	1097 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	SIR1	P21691	654 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	PEX1	P24004	1043 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	YCL049C	P25577	312 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	PRE4	P30657	266 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	RAD16	P31244	790 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	LST4	P34239	828 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	NPR3	P38742	1146 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	SPC72	P39723	622 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	YNL195C	P40168	261 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	FKH2	P41813	862 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	YNR071C	P53757	342 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	CLU1	Q03690	1277 aa	Known RBP	4.9	□□□□□ -1.63
SHE3	YBR130C	DLT1	Q04216	342 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	RTP1	Q12751	981 aa		4.9	□□□□□ -1.63
SHE3	YBR130C	INH1	P01097	85 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	LAT1	P12695	482 aa	Known RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	GFA1	P14742	717 aa	Known RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	CLB4	P24871	460 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	YPT7	P32939	208 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	STT3	P39007	718 aa	Known RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	PIG2	P40187	538 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	IMA5	P40884	581 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	MNN10	P50108	393 aa	Known RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	YRB30	P53107	440 aa	Predicted RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	EIS1	Q05050	843 aa	Known RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	CIA1	Q05583	330 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	TSR2	Q06672	205 aa	Known RBP	4.89	□□□□□ -1.63
SHE3	YBR130C	YCG1	Q06680	1035 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	AAD4	Q07747	329 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	DIN7	Q12086	430 aa		4.89	□□□□□ -1.63
SHE3	YBR130C	URA3	P03962	267 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	CTT1	P06115	562 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	MTF2	P10849	440 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	CAF20	P12962	161 aa	Known RBP	4.88	□□□□□ -1.63
SHE3	YBR130C	SWC3	P31376	625 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	NTH1	P32356	751 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	PUG1	P40100	303 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	MCM6	P53091	1017 aa	Known RBP	4.88	□□□□□ -1.63
SHE3	YBR130C	FDC1	Q03034	503 aa		4.88	□□□□□ -1.63
SHE3	YBR130C	HRP1	Q99383	534 aa	Known RBP	4.88	□□□□□ -1.63
SHE3	YBR130C	LEU2	P04173	364 aa	Predicted RBP	4.87	□□□□□ -1.63
SHE3	YBR130C	UBC1	P21734	215 aa	Known RBP	4.87	□□□□□ -1.63
SHE3	YBR130C	RMA1	P36001	430 aa	Known RBP	4.87	□□□□□ -1.63
SHE3	YBR130C	SFB3	P38810	929 aa		4.87	□□□□□ -1.63
SHE3	YBR130C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SHE3	YBR130C	NUP60	P39705	539 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms