RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A YSH1Q06224 779 aaPredicted RBP3.85□□□□□ -1.79
SUS1YBR111W-A IRC10Q08118 586 aa3.85□□□□□ -1.79
SUS1YBR111W-A PEX15Q08215 383 aa3.85□□□□□ -1.79
SUS1YBR111W-A HMG2P12684 1045 aa3.84□□□□□ -1.79
SUS1YBR111W-A CDC43P18898 376 aa3.84□□□□□ -1.79
SUS1YBR111W-A GLG1P36143 616 aa3.84□□□□□ -1.79
SUS1YBR111W-A SRP68P38687 599 aaKnown RBP3.84□□□□□ -1.79
SUS1YBR111W-A CRG1P38892 291 aaRIP-Chip data3.84□□□□□ -1.79not detected
SUS1YBR111W-A BDH2P39713 417 aa3.84□□□□□ -1.79
SUS1YBR111W-A EAF5P39995 279 aa3.84□□□□□ -1.79
SUS1YBR111W-A TMN3P40071 706 aa3.84□□□□□ -1.79
SUS1YBR111W-A FTR1P40088 404 aa3.84□□□□□ -1.79
SUS1YBR111W-A TIM50Q02776 476 aa3.84□□□□□ -1.79
SUS1YBR111W-A FDC1Q03034 503 aa3.84□□□□□ -1.79
SUS1YBR111W-A HLR1Q04429 423 aa3.84□□□□□ -1.79
SUS1YBR111W-A CWC2Q12046 339 aaPredicted RBP3.84□□□□□ -1.79
SUS1YBR111W-A TAF3Q12297 353 aa3.84□□□□□ -1.79
SUS1YBR111W-A YEL076C-AP0CX16 216 aa3.83□□□□□ -1.8
SUS1YBR111W-A YLR464WP0CX17 216 aa3.83□□□□□ -1.8
SUS1YBR111W-A CDS1P38221 457 aa3.83□□□□□ -1.8
SUS1YBR111W-A KSP1P38691 1029 aaKnown RBP3.83□□□□□ -1.8
SUS1YBR111W-A YEL076CP39971 216 aa3.83□□□□□ -1.8
SUS1YBR111W-A IRC5P43610 853 aa3.83□□□□□ -1.8
SUS1YBR111W-A STU2P46675 888 aa3.83□□□□□ -1.8
SUS1YBR111W-A NMA2P53204 395 aa3.83□□□□□ -1.8
SUS1YBR111W-A MTD1Q02046 320 aaKnown RBP3.83□□□□□ -1.8
SUS1YBR111W-A GIS1Q03833 894 aa3.83□□□□□ -1.8
SUS1YBR111W-A YCG1Q06680 1035 aa3.83□□□□□ -1.8
SUS1YBR111W-A IZH3Q07959 543 aa3.83□□□□□ -1.8
SUS1YBR111W-A DMC1P25453 334 aa3.82□□□□□ -1.8
SUS1YBR111W-A ELF1P36053 145 aa3.82□□□□□ -1.8
SUS1YBR111W-A GMH1P36125 273 aa3.82□□□□□ -1.8
SUS1YBR111W-A PEX8P53248 589 aa3.82□□□□□ -1.8
SUS1YBR111W-A DIP5P53388 608 aa3.82□□□□□ -1.8
SUS1YBR111W-A HOL1P53389 586 aa3.82□□□□□ -1.8
SUS1YBR111W-A SQS1P53866 767 aaKnown RBP3.82□□□□□ -1.8
SUS1YBR111W-A YNL034WP53963 612 aa3.82□□□□□ -1.8
SUS1YBR111W-A YNL018CP53976 612 aa3.82□□□□□ -1.8
SUS1YBR111W-A YOR378WQ08902 515 aa3.82□□□□□ -1.8
SUS1YBR111W-A BMS1Q08965 1183 aaKnown RBP3.82□□□□□ -1.8
SUS1YBR111W-A AIM41Q12032 185 aa3.82□□□□□ -1.8
SUS1YBR111W-A RKI1Q12189 258 aa3.82□□□□□ -1.8
SUS1YBR111W-A LAM4P38800 1345 aa3.81□□□□□ -1.8
SUS1YBR111W-A RMA1P36001 430 aaKnown RBP3.81□□□□□ -1.8
SUS1YBR111W-A APL3P38065 1025 aa3.81□□□□□ -1.8
SUS1YBR111W-A GRX7P38068 203 aa3.81□□□□□ -1.8
SUS1YBR111W-A EHT1P38295 451 aa3.81□□□□□ -1.8
SUS1YBR111W-A TDP1P38319 544 aa3.81□□□□□ -1.8
SUS1YBR111W-A QRI1P43123 477 aaKnown RBP3.81□□□□□ -1.8
SUS1YBR111W-A YDL183CP48569 320 aa3.81□□□□□ -1.8
SUS1YBR111W-A VPS73P53142 486 aaKnown RBP3.81□□□□□ -1.8
SUS1YBR111W-A YGR054WP53235 642 aaKnown RBP3.81□□□□□ -1.8
SUS1YBR111W-A SNF12P53628 566 aa3.81□□□□□ -1.8
SUS1YBR111W-A SND1Q04007 877 aa3.81□□□□□ -1.8
SUS1YBR111W-A UFO1Q04511 668 aa3.81□□□□□ -1.8
SUS1YBR111W-A SLX4Q12098 748 aa3.81□□□□□ -1.8
SUS1YBR111W-A VPS5Q92331 675 aa3.81□□□□□ -1.8
SUS1YBR111W-A GFA1P14742 717 aaKnown RBP3.8□□□□□ -1.8
SUS1YBR111W-A KCC4P25389 1037 aa3.8□□□□□ -1.8
SUS1YBR111W-A MNT2P53059 558 aa3.8□□□□□ -1.8
SUS1YBR111W-A PEF1P53238 335 aa3.8□□□□□ -1.8
SUS1YBR111W-A SPC98P53540 846 aa3.8□□□□□ -1.8
SUS1YBR111W-A TGL2P54857 326 aa3.8□□□□□ -1.8
SUS1YBR111W-A MSL5Q12186 476 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SUS1YBR111W-A TMA7Q3E764 64 aaKnown RBP3.8□□□□□ -1.8
SUS1YBR111W-A MPD2Q99316 277 aa3.8□□□□□ -1.8
SUS1YBR111W-A MRPL7P36519 292 aa3.79□□□□□ -1.8
SUS1YBR111W-A PPE1P38796 400 aa3.79□□□□□ -1.8
SUS1YBR111W-A STL1P39932 569 aa3.79□□□□□ -1.8
SUS1YBR111W-A YIL092WP40497 633 aa3.79□□□□□ -1.8
SUS1YBR111W-A PMT6P42934 759 aa3.79□□□□□ -1.8
SUS1YBR111W-A TAH11P47112 604 aa3.79□□□□□ -1.8
SUS1YBR111W-A IOC4Q04213 475 aa3.79□□□□□ -1.8
SUS1YBR111W-A CWH43P25618 953 aa3.78□□□□□ -1.8
SUS1YBR111W-A YEL025CP39991 1188 aa3.78□□□□□ -1.8
SUS1YBR111W-A MDR1P53258 950 aa3.78□□□□□ -1.8
SUS1YBR111W-A MFM1Q02783 413 aa3.78□□□□□ -1.8
SUS1YBR111W-A EFR3Q03653 782 aaKnown RBP3.78□□□□□ -1.8
SUS1YBR111W-A TRS23Q03784 219 aa3.78□□□□□ -1.8
SUS1YBR111W-A YDR179W-AQ03983 463 aa3.78□□□□□ -1.8
SUS1YBR111W-A RTK1Q12100 620 aaPredicted RBP3.78□□□□□ -1.8
SUS1YBR111W-A PSF3Q12146 194 aa3.78□□□□□ -1.8
SUS1YBR111W-A SUT2Q12286 268 aa3.78□□□□□ -1.8
SUS1YBR111W-A TUF1P02992 437 aaKnown RBP3.77□□□□□ -1.81
SUS1YBR111W-A PHO3P24031 467 aa3.77□□□□□ -1.81
SUS1YBR111W-A EMP70P32802 667 aa3.77□□□□□ -1.81
SUS1YBR111W-A DHR2P36009 735 aaPredicted RBP3.77□□□□□ -1.81
SUS1YBR111W-A MUP3P38734 546 aa3.77□□□□□ -1.81
SUS1YBR111W-A MIT1P40002 666 aa3.77□□□□□ -1.81
SUS1YBR111W-A LRO1P40345 661 aa3.77□□□□□ -1.81
SUS1YBR111W-A YIP4P53093 235 aa3.77□□□□□ -1.81
SUS1YBR111W-A CEF1Q03654 590 aaPredicted RBP3.77□□□□□ -1.81
SUS1YBR111W-A NUR1Q12066 484 aa3.77□□□□□ -1.81
SUS1YBR111W-A PHO5P00635 467 aa3.76□□□□□ -1.81
SUS1YBR111W-A URA3P03962 267 aa3.76□□□□□ -1.81
SUS1YBR111W-A PCK1P10963 549 aa3.76□□□□□ -1.81
SUS1YBR111W-A STE12P13574 688 aa3.76□□□□□ -1.81
SUS1YBR111W-A STE4P18851 423 aa3.76□□□□□ -1.81
SUS1YBR111W-A ARG1P22768 420 aa3.76□□□□□ -1.81
SUS1YBR111W-A NIC96P34077 839 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 90.9 ms