RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 SYNE4Q8N205 404 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 GOLGA6L1Q8N7Z2 621 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 MNS1Q8NEH6 495 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 MASTLQ96GX5 879 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 MYCBPQ99417 103 aaPredicted RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 TAOK3Q9H2K8 898 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 ZNF277Q9NRM2 450 aaPredicted RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 LMBRD1Q9NUN5 540 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 CWC15Q9P013 229 aaKnown RBP6.03□□□□□ -1.44
SSX9-202ENST00000608568 TRIM35Q9UPQ4 493 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 PDZRN3Q9UPQ7 1066 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 MTMR7Q9Y216 660 aa6.03□□□□□ -1.44
SSX9-202ENST00000608568 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.03□□□□□ -1.44
SSX9-202ENST00000608568 BRCA2P51587 3418 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 MKI67P46013 3256 aaKnown RBP6.02□□□□□ -1.45
SSX9-202ENST00000608568 SMTNL1A8MU46 457 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 CALRP27797 417 aaKnown RBP6.02□□□□□ -1.45
SSX9-202ENST00000608568 PDE6BP35913 854 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 TMPOP42166 694 aaKnown RBP6.02□□□□□ -1.45
SSX9-202ENST00000608568 TNNT3P45378 269 aaPredicted RBP6.02□□□□□ -1.45
SSX9-202ENST00000608568 IRF5Q13568 498 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 RABEP1Q15276 862 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 CRY2Q49AN0 593 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 TEX35Q5T0J7 233 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 SUSD4Q5VX71 490 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 TXLNBQ8N3L3 684 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 KLRG1Q96E93 195 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 NCAPGQ9BPX3 1015 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 CHMP4AQ9BY43 222 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 RASSF4Q9H2L5 321 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 TSPY26PQ9H489 355 aa6.02□□□□□ -1.45
SSX9-202ENST00000608568 V9GYY5 206 aaPredicted RBP6.02□□□□□ -1.45
SSX9-202ENST00000608568 PATL2C9JE40 543 aaKnown RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 NPHP1O15259 732 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 TUBB4AP04350 444 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 NPR1P16066 1061 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 MCCP23508 829 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 FKBP4Q02790 459 aaKnown RBP eCLIP6.01□□□□□ -1.45
SSX9-202ENST00000608568 FMR1Q06787 632 aaKnown RBP eCLIP6.01□□□□□ -1.45
SSX9-202ENST00000608568 FSTL1Q12841 308 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 GRIPAP1Q4V328 841 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 TMEM259Q4ZIN3 620 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 CCDC93Q567U6 631 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 NOM1Q5C9Z4 860 aaKnown RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 BMP2KLQ5H9B9 411 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 C16orf71Q8IYS4 520 aaPredicted RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 ZNF34Q8IZ26 560 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 SMC1BQ8NDV3 1235 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 ZNF397Q8NF99 534 aaPredicted RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 CNKSR1Q969H4 720 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 TACO1Q9BSH4 297 aaKnown RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 NPDC1Q9NQX5 325 aaPredicted RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 FEZ2Q9UHY8 353 aaPredicted RBP6.01□□□□□ -1.45
SSX9-202ENST00000608568 TSPYL4Q9UJ04 414 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 ZNF652Q9Y2D9 606 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 PAPPA2Q9BXP8 1791 aa6.01□□□□□ -1.45
SSX9-202ENST00000608568 ABCC4O15439 1325 aa6□□□□□ -1.45
SSX9-202ENST00000608568 MYO5AQ9Y4I1 1855 aaKnown RBP6□□□□□ -1.45
SSX9-202ENST00000608568 TRIM6-TRIM34B2RNG4 842 aa6□□□□□ -1.45
SSX9-202ENST00000608568 ATP8B1O43520 1251 aa6□□□□□ -1.45
SSX9-202ENST00000608568 EVI5O60447 810 aa6□□□□□ -1.45
SSX9-202ENST00000608568 PLCG2P16885 1265 aa6□□□□□ -1.45
SSX9-202ENST00000608568 EIF2S2P20042 333 aaKnown RBP6□□□□□ -1.45
SSX9-202ENST00000608568 CYP2C19P33261 490 aa6□□□□□ -1.45
SSX9-202ENST00000608568 GPS2Q13227 327 aa6□□□□□ -1.45
SSX9-202ENST00000608568 IFFO2Q5TF58 517 aa6□□□□□ -1.45
SSX9-202ENST00000608568 MYSM1Q5VVJ2 828 aa6□□□□□ -1.45
SSX9-202ENST00000608568 ICE2Q659A1 982 aa6□□□□□ -1.45
SSX9-202ENST00000608568 WWC1Q8IX03 1113 aa6□□□□□ -1.45
SSX9-202ENST00000608568 JMYQ8N9B5 988 aa6□□□□□ -1.45
SSX9-202ENST00000608568 KIF18AQ8NI77 898 aa6□□□□□ -1.45
SSX9-202ENST00000608568 KIAA1524Q8TCG1 905 aa6□□□□□ -1.45
SSX9-202ENST00000608568 PHOX2BQ99453 314 aa6□□□□□ -1.45
SSX9-202ENST00000608568 TRIM34Q9BYJ4 488 aa6□□□□□ -1.45
SSX9-202ENST00000608568 SMC4Q9NTJ3 1288 aa6□□□□□ -1.45
SSX9-202ENST00000608568 FAM217BQ9NTX9 383 aaPredicted RBP6□□□□□ -1.45
SSX9-202ENST00000608568 RBM28Q9NW13 759 aaKnown RBP6□□□□□ -1.45
SSX9-202ENST00000608568 ADAMTS8Q9UP79 889 aa6□□□□□ -1.45
SSX9-202ENST00000608568 PASKQ96RG2 1323 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 SHTN1A0MZ66 631 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 ERVV-1B6SEH8 477 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 KIF2AO00139 706 aaPredicted RBP5.99□□□□□ -1.45
SSX9-202ENST00000608568 VEGFAP15692 232 aaPredicted RBP5.99□□□□□ -1.45
SSX9-202ENST00000608568 CAPN2P17655 700 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 U2AF2P26368 475 aaKnown RBP eCLIP5.99□□□□□ -1.45
SSX9-202ENST00000608568 RFC5P40937 340 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 IARSP41252 1262 aaKnown RBP5.99□□□□□ -1.45
SSX9-202ENST00000608568 MCM2P49736 904 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 GTF2A1P52655 376 aaPredicted RBP5.99□□□□□ -1.45
SSX9-202ENST00000608568 LMOD3Q0VAK6 560 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 TRDNQ13061 729 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
SSX9-202ENST00000608568 CCDC27Q2M243 656 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 NBPF20Q3BBV1 942 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 COL13A1Q5TAT6 717 aaPredicted RBP5.99□□□□□ -1.45
SSX9-202ENST00000608568 KIF6Q6ZMV9 814 aa5.99□□□□□ -1.45
SSX9-202ENST00000608568 WDR63Q8IWG1 891 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms