RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MCTP1Q6DN14 999 aa8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 FBXL6Q8N531 539 aa8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 YIPF2Q9BWQ6 316 aa8.06□□□□□ -1.12
SMCHD1-205ENST00000581383 ANKRD33BA6NCL7 494 aa8.05□□□□□ -1.12
SMCHD1-205ENST00000581383 VN1R5Q7Z5H4 357 aa8.05□□□□□ -1.12
SMCHD1-205ENST00000581383 SHKBP1Q8TBC3 707 aa8.05□□□□□ -1.12
SMCHD1-205ENST00000581383 MFSD14AQ96MC6 490 aa8.05□□□□□ -1.12
SMCHD1-205ENST00000581383 LIN7BQ9HAP6 207 aa8.05□□□□□ -1.12
SMCHD1-205ENST00000581383 RAD18Q9NS91 495 aa8.05□□□□□ -1.12
SMCHD1-205ENST00000581383 METTL12A8MUP2 240 aa8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 IRAK1P51617 712 aa8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 PDE3BQ13370 1112 aa8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 HP1BP3Q5SSJ5 553 aaPredicted RBP8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 PAOXQ6QHF9 649 aa8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 NPM2Q86SE8 214 aaKnown RBP8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 GJD3Q8N144 294 aa8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
SMCHD1-205ENST00000581383 A0A096LPE4 126 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 A0A1W2PPZ6 126 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 MEGF11A6BM72 1044 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 PAX4O43316 350 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 ESRRAP11474 423 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 CD97P48960 835 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 SGO2Q562F6 1265 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 ZDHHC13Q8IUH4 622 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 ASB16Q96NS5 453 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 OSBPL1AQ9BXW6 950 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 EHD4Q9H223 541 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 SOX17Q9H6I2 414 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 ZFYVE1Q9HBF4 777 aa8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 ARID1BQ8NFD5 2236 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-205ENST00000581383 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 FAM95CA0A1B0GW59 222 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 TM4SF5O14894 197 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 CYP11A1P05108 521 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 ERCC3P19447 782 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 PCDH1Q08174 1060 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 ZNF428Q96B54 188 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 CLEC4MQ9H2X3 399 aaPredicted RBP8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
SMCHD1-205ENST00000581383 DRD2P14416 443 aa8.01□□□□□ -1.13
SMCHD1-205ENST00000581383 PEAR1Q5VY43 1037 aaPredicted RBP8.01□□□□□ -1.13
SMCHD1-205ENST00000581383 TMC7Q7Z402 723 aa8.01□□□□□ -1.13
SMCHD1-205ENST00000581383 CORO1BQ9BR76 489 aa8.01□□□□□ -1.13
SMCHD1-205ENST00000581383 RBCK1Q9BYM8 510 aa8.01□□□□□ -1.13
SMCHD1-205ENST00000581383 KRTAP4-2Q9BYR5 136 aa8.01□□□□□ -1.13
SMCHD1-205ENST00000581383 A0A1W2PP55 124 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 CPNE3O75131 537 aaKnown RBP8□□□□□ -1.13
SMCHD1-205ENST00000581383 GADD45BO75293 160 aaPredicted RBP8□□□□□ -1.13
SMCHD1-205ENST00000581383 GP2P55259 537 aaKnown RBP8□□□□□ -1.13
SMCHD1-205ENST00000581383 POU4F3Q15319 338 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 AKAP4Q5JQC9 854 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 NPAS4Q8IUM7 802 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 SMG8Q8ND04 991 aaKnown RBP8□□□□□ -1.13
SMCHD1-205ENST00000581383 FBLIM1Q8WUP2 373 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 CITED4Q96RK1 184 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
SMCHD1-205ENST00000581383 ANGEL1Q9UNK9 670 aaKnown RBP8□□□□□ -1.13
SMCHD1-205ENST00000581383 MED26O95402 600 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 WNT11O96014 354 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 RAB6AP20340 208 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 MAOBP27338 520 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 RBM25P49756 843 aaKnown RBP7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 PDE3AQ14432 1141 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 SPRED3Q2MJR0 410 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 DYMQ7RTS9 669 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
SMCHD1-205ENST00000581383 SOX4Q06945 474 aaPredicted RBP7.98□□□□□ -1.13
SMCHD1-205ENST00000581383 CCNJLQ8IV13 435 aa7.98□□□□□ -1.13
SMCHD1-205ENST00000581383 BCL2L13Q9BXK5 485 aa7.98□□□□□ -1.13
SMCHD1-205ENST00000581383 SUGCTQ9HAC7 445 aa7.98□□□□□ -1.13
SMCHD1-205ENST00000581383 PIM2Q9P1W9 311 aa7.98□□□□□ -1.13
SMCHD1-205ENST00000581383 GRIA4P48058 902 aa7.97□□□□□ -1.13
SMCHD1-205ENST00000581383 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMCHD1-205ENST00000581383 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
SMCHD1-205ENST00000581383 FMNL2Q96PY5 1086 aa7.97□□□□□ -1.13
SMCHD1-205ENST00000581383 NPHS2Q9NP85 383 aa7.97□□□□□ -1.13
SMCHD1-205ENST00000581383 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
SMCHD1-205ENST00000581383 COL17A1Q9UMD9 1497 aaPredicted RBP7.96□□□□□ -1.13
SMCHD1-205ENST00000581383 KIAA1324LA8MWY0 1029 aaPredicted RBP7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 PLCB3Q01970 1234 aa7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 ORC1Q13415 861 aa7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 FZD5Q13467 585 aa7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 DMRTB1Q96MA1 342 aa7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 FAM129BQ96TA1 746 aa7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 METTL22Q9BUU2 404 aaPredicted RBP7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 NIF3L1Q9GZT8 377 aa7.96□□□□□ -1.14
SMCHD1-205ENST00000581383 PRR19A6NJB7 356 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 GPR182O15218 404 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 TREHO43280 583 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 DLGAP3O95886 979 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 MAP7Q14244 749 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 DUSP27Q5VZP5 1158 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 CDPF1Q6NVV7 123 aa7.95□□□□□ -1.14
SMCHD1-205ENST00000581383 GIPC2Q8TF65 315 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms