RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 TPRNQ4KMQ1 711 aa6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 ETFBKMTQ8IXQ9 262 aa6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 SMG8Q8ND04 991 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 PIK3R5Q8WYR1 880 aa6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 SETD1BQ9UPS6 1966 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 IQSEC2Q5JU85 1478 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 UBAP1LF5GYI3 381 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 TIAF1O95411 115 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 PAPLNO95428 1278 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 CABP4P57796 275 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 TTC39BQ5VTQ0 682 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 POP1Q99575 1024 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 ZMYND15Q9H091 742 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 PAK6Q9NQU5 681 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 SH2B1Q9NRF2 756 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 ABCA8O94911 1581 aa6.34□□□□□ -1.39
PDLIM5-218ENST00000513341 RAPGEF2Q9Y4G8 1499 aa6.34□□□□□ -1.4
PDLIM5-218ENST00000513341 RIMS1Q86UR5 1692 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-218ENST00000513341 ABCA9Q8IUA7 1624 aa6.33□□□□□ -1.4
PDLIM5-218ENST00000513341 SCNN1AP37088 669 aa6.33□□□□□ -1.4
PDLIM5-218ENST00000513341 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
PDLIM5-218ENST00000513341 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
PDLIM5-218ENST00000513341 PTPRTO14522 1441 aa6.33□□□□□ -1.4
PDLIM5-218ENST00000513341 BIN1O00499 593 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 CYP26A1O43174 497 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 CDC25BP30305 580 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 FLIIQ13045 1269 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 FBXL6Q8N531 539 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 ABI2Q9NYB9 513 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 FANCAO15360 1455 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 MAGI2Q86UL8 1455 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 AKNAQ7Z591 1439 aa6.32□□□□□ -1.4
PDLIM5-218ENST00000513341 ATP10BO94823 1461 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 FAM95CA0A1B0GW59 222 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 ARL4DP49703 201 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 EZH1Q92800 747 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 VRTNQ9H8Y1 702 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 CYP4F12Q9HCS2 524 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 FHOD3Q2V2M9 1422 aa6.31□□□□□ -1.4
PDLIM5-218ENST00000513341 PREX1Q8TCU6 1659 aa6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 DENND4BO75064 1496 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 A6NJR5 290 aa6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 UBTFP17480 764 aaKnown RBP6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 NUTM2GQ5VZR2 741 aa6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 FLCNQ8NFG4 579 aa6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 STRCQ7RTU9 1775 aa6.3□□□□□ -1.4
PDLIM5-218ENST00000513341 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 NFKBIEO00221 500 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 FARP2O94887 1054 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 RXRBP28702 533 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 NLRP12P59046 1061 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 FKBP5Q13451 457 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 C16orf46Q6P387 395 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 TTC37Q6PGP7 1564 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 NCAPG2Q86XI2 1143 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 CCER1Q8TC90 406 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 GATA6Q92908 595 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 GLMNQ92990 594 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 PRKAG2Q9UGJ0 569 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 SOX13Q9UN79 622 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 ARHGEF40Q8TER5 1519 aa6.29□□□□□ -1.4
PDLIM5-218ENST00000513341 FRMPD1Q5SYB0 1578 aa6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 C12orf50Q8NA57 414 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 BHLHE22Q8NFJ8 381 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 SOX17Q9H6I2 414 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 SALL4Q9UJQ4 1053 aa6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 RICTORQ6R327 1708 aa6.28□□□□□ -1.4
PDLIM5-218ENST00000513341 FER1L4A9Z1Z3 1794 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 EFCAB5A4FU69 1503 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 PLEKHD1A6NEE1 506 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 TNFRSF10BO14763 440 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 ADMP35318 185 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 CYP27A1Q02318 531 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 MLECQ14165 292 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 NFKBIBQ15653 356 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 FAM200AQ8TCP9 573 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 YIPF2Q9BWQ6 316 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 LTBP4Q8N2S1 1624 aa6.27□□□□□ -1.41
PDLIM5-218ENST00000513341 UHRF1BP1Q6BDS2 1440 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 ZMYM4Q5VZL5 1548 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 CYP2E1P05181 493 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 PRKCSHP14314 528 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 ZNF124Q15973 351 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 SWI5Q1ZZU3 235 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 FAM26DQ5JW98 314 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 EXOSC6Q5RKV6 272 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 ATG4DQ86TL0 474 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms