RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 NBPF12Q5TAG4 269 aaPredicted RBP17.57■□□□□ 0.4
ATG3-206ENST00000492886 SPRYD7Q5W111 196 aa17.57■□□□□ 0.4
ATG3-206ENST00000492886 CFHR5Q9BXR6 569 aa17.57■□□□□ 0.4
ATG3-206ENST00000492886 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
ATG3-206ENST00000492886 COPRSQ9NQ92 184 aa17.57■□□□□ 0.4
ATG3-206ENST00000492886 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
ATG3-206ENST00000492886 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATG3-206ENST00000492886 TNFAIP1Q13829 316 aa17.56■□□□□ 0.4
ATG3-206ENST00000492886 PRKG1Q13976 671 aa17.56■□□□□ 0.4
ATG3-206ENST00000492886 SUPT20HL1Q3ZLR7 823 aa17.56■□□□□ 0.4
ATG3-206ENST00000492886 NOM1Q5C9Z4 860 aaKnown RBP17.56■□□□□ 0.4
ATG3-206ENST00000492886 VEZTQ9HBM0 779 aa17.56■□□□□ 0.4
ATG3-206ENST00000492886 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
ATG3-206ENST00000492886 USP2O75604 605 aaPredicted RBP17.55■□□□□ 0.4
ATG3-206ENST00000492886 SLC5A1P13866 664 aa17.55■□□□□ 0.4
ATG3-206ENST00000492886 TRIM27P14373 513 aa17.55■□□□□ 0.4
ATG3-206ENST00000492886 CHAF1AQ13111 956 aaPredicted RBP17.55■□□□□ 0.4
ATG3-206ENST00000492886 ZDHHC15Q96MV8 337 aa17.55■□□□□ 0.4
ATG3-206ENST00000492886 MYH2Q9UKX2 1941 aa17.55■□□□□ 0.4
ATG3-206ENST00000492886 ZBTB48P10074 688 aaPredicted RBP17.54■□□□□ 0.4
ATG3-206ENST00000492886 IL15P40933 162 aaPredicted RBP17.54■□□□□ 0.4
ATG3-206ENST00000492886 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
ATG3-206ENST00000492886 CDAN1Q8IWY9 1227 aa17.54■□□□□ 0.4
ATG3-206ENST00000492886 MIER1Q8N108 512 aa17.54■□□□□ 0.4
ATG3-206ENST00000492886 CLMNQ96JQ2 1002 aa17.54■□□□□ 0.4
ATG3-206ENST00000492886 SIL1Q9H173 461 aa17.54■□□□□ 0.4
ATG3-206ENST00000492886 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
ATG3-206ENST00000492886 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
ATG3-206ENST00000492886 MAST3O60307 1309 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 BCAR3O75815 825 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 GNAI3P08754 354 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 SREBF2Q12772 1141 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 DGKZQ13574 1117 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
ATG3-206ENST00000492886 HHIPL2Q6UWX4 724 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 TEKT1Q969V4 418 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 WNK4Q96J92 1243 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
ATG3-206ENST00000492886 SALL1Q9NSC2 1324 aa17.52■□□□□ 0.4
ATG3-206ENST00000492886 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
ATG3-206ENST00000492886 FKBP1CQ5VVH2 108 aa17.52■□□□□ 0.4
ATG3-206ENST00000492886 WDR66Q8TBY9 1149 aa17.52■□□□□ 0.4
ATG3-206ENST00000492886 RPAP1Q9BWH6 1393 aaPredicted RBP17.52■□□□□ 0.39
ATG3-206ENST00000492886 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
ATG3-206ENST00000492886 GJA5P36382 358 aa17.51■□□□□ 0.39
ATG3-206ENST00000492886 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
ATG3-206ENST00000492886 RGS19P49795 217 aa17.51■□□□□ 0.39
ATG3-206ENST00000492886 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
ATG3-206ENST00000492886 ANKRD13AQ8IZ07 590 aa17.51■□□□□ 0.39
ATG3-206ENST00000492886 SLC10A4Q96EP9 437 aa17.51■□□□□ 0.39
ATG3-206ENST00000492886 TMEM39BQ9GZU3 492 aa17.51■□□□□ 0.39
ATG3-206ENST00000492886 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
ATG3-206ENST00000492886 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
ATG3-206ENST00000492886 SEMA3EO15041 775 aa17.5■□□□□ 0.39
ATG3-206ENST00000492886 TBC1D8O95759 1140 aa17.5■□□□□ 0.39
ATG3-206ENST00000492886 TNNI2P48788 182 aa17.5■□□□□ 0.39
ATG3-206ENST00000492886 INHBEP58166 350 aa17.5■□□□□ 0.39
ATG3-206ENST00000492886 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
ATG3-206ENST00000492886 FAM83AQ86UY5 434 aa17.5■□□□□ 0.39
ATG3-206ENST00000492886 PDS5AQ29RF7 1337 aaKnown RBP17.49■□□□□ 0.39
ATG3-206ENST00000492886 DOCK2Q92608 1830 aa17.49■□□□□ 0.39
ATG3-206ENST00000492886 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
ATG3-206ENST00000492886 PHKA1P46020 1223 aa17.49■□□□□ 0.39
ATG3-206ENST00000492886 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.49■□□□□ 0.39
ATG3-206ENST00000492886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATG3-206ENST00000492886 ZNF296Q8WUU4 475 aaPredicted RBP17.49■□□□□ 0.39
ATG3-206ENST00000492886 R3HDMLQ9H3Y0 253 aa17.49■□□□□ 0.39
ATG3-206ENST00000492886 GPR25O00155 361 aa17.48■□□□□ 0.39
ATG3-206ENST00000492886 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
ATG3-206ENST00000492886 PRDX5P30044 214 aa17.48■□□□□ 0.39
ATG3-206ENST00000492886 CTU1Q7Z7A3 348 aaKnown RBP17.48■□□□□ 0.39
ATG3-206ENST00000492886 IFNL1Q8IU54 200 aa17.48■□□□□ 0.39
ATG3-206ENST00000492886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.48■□□□□ 0.39
ATG3-206ENST00000492886 AK9Q5TCS8 1911 aa17.48■□□□□ 0.39
ATG3-206ENST00000492886 CCDC85CA6NKD9 419 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATG3-206ENST00000492886 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 ADORA1P30542 326 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 CACNB3P54284 484 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATG3-206ENST00000492886 CCDC102BQ68D86 513 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
ATG3-206ENST00000492886 DENND2AQ9ULE3 1009 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
ATG3-206ENST00000492886 GNAI2P04899 355 aa17.46■□□□□ 0.39
ATG3-206ENST00000492886 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
ATG3-206ENST00000492886 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
ATG3-206ENST00000492886 MS4A4AQ96JQ5 239 aa17.46■□□□□ 0.39
ATG3-206ENST00000492886 RFX7Q2KHR2 1363 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 PNMA6EA0A0J9YXQ4 647 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 TIMM10P62072 90 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 TFCP2Q12800 502 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 VGLL4Q14135 290 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 PTPN18Q99952 460 aa17.45■□□□□ 0.38
ATG3-206ENST00000492886 GAKO14976 1311 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms