RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 ZNF70Q9UC06 446 aaPredicted RBP19.39■□□□□ 0.69
HMGB2-203ENST00000446922 ANGEL1Q9UNK9 670 aaKnown RBP19.39■□□□□ 0.69
HMGB2-203ENST00000446922 PCDHAC2Q9Y5I4 1007 aa19.39■□□□□ 0.69
HMGB2-203ENST00000446922 AKAP11Q9UKA4 1901 aa19.39■□□□□ 0.69
HMGB2-203ENST00000446922 CLRN2A0PK11 232 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 TNNI2P48788 182 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 MTX1Q13505 466 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 RASA3Q14644 834 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
HMGB2-203ENST00000446922 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 ARAP2Q8WZ64 1704 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 SLC10A4Q96EP9 437 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 VEZTQ9HBM0 779 aa19.38■□□□□ 0.69
HMGB2-203ENST00000446922 LRRFIP2Q9Y608 721 aaKnown RBP19.38■□□□□ 0.69
HMGB2-203ENST00000446922 FKBP1CQ5VVH2 108 aa19.37■□□□□ 0.69
HMGB2-203ENST00000446922 HHIPL2Q6UWX4 724 aa19.37■□□□□ 0.69
HMGB2-203ENST00000446922 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
HMGB2-203ENST00000446922 ZDHHC15Q96MV8 337 aa19.37■□□□□ 0.69
HMGB2-203ENST00000446922 MEIS3Q99687 375 aa19.37■□□□□ 0.69
HMGB2-203ENST00000446922 CFHR5Q9BXR6 569 aa19.37■□□□□ 0.69
HMGB2-203ENST00000446922 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
HMGB2-203ENST00000446922 GNL3LQ9NVN8 582 aaKnown RBP19.37■□□□□ 0.69
HMGB2-203ENST00000446922 SEMA3EO15041 775 aa19.36■□□□□ 0.69
HMGB2-203ENST00000446922 ZBTB48P10074 688 aaPredicted RBP19.36■□□□□ 0.69
HMGB2-203ENST00000446922 IREB2P48200 963 aaKnown RBP19.36■□□□□ 0.69
HMGB2-203ENST00000446922 CHAF1AQ13111 956 aaPredicted RBP19.36■□□□□ 0.69
HMGB2-203ENST00000446922 SPRYD7Q5W111 196 aa19.36■□□□□ 0.69
HMGB2-203ENST00000446922 MIER1Q8N108 512 aa19.36■□□□□ 0.69
HMGB2-203ENST00000446922 IQSEC3Q9UPP2 1182 aaPredicted RBP19.36■□□□□ 0.69
HMGB2-203ENST00000446922 PRKG1Q13976 671 aa19.35■□□□□ 0.69
HMGB2-203ENST00000446922 ATP2B3Q16720 1220 aa19.35■□□□□ 0.69
HMGB2-203ENST00000446922 NBPF12Q5TAG4 269 aaPredicted RBP19.35■□□□□ 0.69
HMGB2-203ENST00000446922 MANSC4A6NHS7 340 aaPredicted RBP19.34■□□□□ 0.69
HMGB2-203ENST00000446922 USP2O75604 605 aaPredicted RBP19.34■□□□□ 0.69
HMGB2-203ENST00000446922 ALDH1A1P00352 501 aa19.34■□□□□ 0.69
HMGB2-203ENST00000446922 TRIM27P14373 513 aa19.34■□□□□ 0.69
HMGB2-203ENST00000446922 FAM83AQ86UY5 434 aa19.34■□□□□ 0.69
HMGB2-203ENST00000446922 ANKRD13AQ8IZ07 590 aa19.34■□□□□ 0.69
HMGB2-203ENST00000446922 SIL1Q9H173 461 aa19.34■□□□□ 0.69
HMGB2-203ENST00000446922 AKAP2Q9Y2D5 859 aa19.34■□□□□ 0.69
HMGB2-203ENST00000446922 AOX1Q06278 1338 aa19.33■□□□□ 0.69
HMGB2-203ENST00000446922 SALL1Q9NSC2 1324 aa19.33■□□□□ 0.69
HMGB2-203ENST00000446922 BCAR3O75815 825 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.68
HMGB2-203ENST00000446922 DGKZQ13574 1117 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 GRIK5Q16478 980 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 HOOK2Q96ED9 719 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 TEPSINQ96N21 525 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 MCOLN1Q9GZU1 580 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 DENND2AQ9ULE3 1009 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 CASP8AP2Q9UKL3 1982 aa19.33■□□□□ 0.68
HMGB2-203ENST00000446922 SSC5DA1L4H1 1573 aa19.32■□□□□ 0.68
HMGB2-203ENST00000446922 GNAI2P04899 355 aa19.32■□□□□ 0.68
HMGB2-203ENST00000446922 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
HMGB2-203ENST00000446922 TMOD2Q9NZR1 351 aa19.32■□□□□ 0.68
HMGB2-203ENST00000446922 SRGAP3O43295 1099 aa19.31■□□□□ 0.68
HMGB2-203ENST00000446922 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
HMGB2-203ENST00000446922 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
HMGB2-203ENST00000446922 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
HMGB2-203ENST00000446922 FRAT1Q92837 279 aaPredicted RBP19.31■□□□□ 0.68
HMGB2-203ENST00000446922 PA2G4Q9UQ80 394 aaKnown RBP19.31■□□□□ 0.68
HMGB2-203ENST00000446922 PDS5AQ29RF7 1337 aaKnown RBP19.3■□□□□ 0.68
HMGB2-203ENST00000446922 TCP10L2B9ZVM9 353 aa19.3■□□□□ 0.68
HMGB2-203ENST00000446922 WNK4Q96J92 1243 aa19.3■□□□□ 0.68
HMGB2-203ENST00000446922 PKN2Q16513 984 aaKnown RBP19.29■□□□□ 0.68
HMGB2-203ENST00000446922 LDHBP07195 334 aaKnown RBP19.28■□□□□ 0.68
HMGB2-203ENST00000446922 MAP3K9P80192 1104 aa19.28■□□□□ 0.68
HMGB2-203ENST00000446922 CCDC102BQ68D86 513 aa19.28■□□□□ 0.68
HMGB2-203ENST00000446922 OTUD7BQ6GQQ9 843 aa19.28■□□□□ 0.68
HMGB2-203ENST00000446922 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
HMGB2-203ENST00000446922 CLMNQ96JQ2 1002 aa19.28■□□□□ 0.68
HMGB2-203ENST00000446922 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
HMGB2-203ENST00000446922 FZD1Q9UP38 647 aa19.28■□□□□ 0.68
HMGB2-203ENST00000446922 LAMB1P07942 1786 aa19.27■□□□□ 0.68
HMGB2-203ENST00000446922 TESPA1A2RU30 521 aaPredicted RBP19.27■□□□□ 0.68
HMGB2-203ENST00000446922 TBC1D8O95759 1140 aa19.27■□□□□ 0.68
HMGB2-203ENST00000446922 PHKA1P46020 1223 aa19.27■□□□□ 0.68
HMGB2-203ENST00000446922 RGS19P49795 217 aa19.27■□□□□ 0.68
HMGB2-203ENST00000446922 MKRN3Q13064 507 aaKnown RBP19.27■□□□□ 0.68
HMGB2-203ENST00000446922 MVPQ14764 893 aaKnown RBP19.27■□□□□ 0.68
HMGB2-203ENST00000446922 IFNL1Q8IU54 200 aa19.27■□□□□ 0.68
HMGB2-203ENST00000446922 RPAP1Q9BWH6 1393 aaPredicted RBP19.27■□□□□ 0.68
HMGB2-203ENST00000446922 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
HMGB2-203ENST00000446922 CCDC85CA6NKD9 419 aa19.26■□□□□ 0.67
HMGB2-203ENST00000446922 GPR25O00155 361 aa19.26■□□□□ 0.67
HMGB2-203ENST00000446922 TIMM10P62072 90 aa19.26■□□□□ 0.67
HMGB2-203ENST00000446922 SPTY2D1Q68D10 685 aaPredicted RBP19.26■□□□□ 0.67
HMGB2-203ENST00000446922 SLF2Q8IX21 1173 aa19.26■□□□□ 0.67
HMGB2-203ENST00000446922 FAM151AQ8WW52 585 aa19.26■□□□□ 0.67
HMGB2-203ENST00000446922 MYH13Q9UKX3 1938 aa19.25■□□□□ 0.67
HMGB2-203ENST00000446922 A0A1B0GUL7 405 aa19.25■□□□□ 0.67
HMGB2-203ENST00000446922 TFCP2Q12800 502 aa19.25■□□□□ 0.67
HMGB2-203ENST00000446922 G3BP1Q13283 466 aaKnown RBP eCLIP19.25■□□□□ 0.67
HMGB2-203ENST00000446922 DCAF15Q66K64 600 aa19.25■□□□□ 0.67
HMGB2-203ENST00000446922 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.25■□□□□ 0.67
HMGB2-203ENST00000446922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.25■□□□□ 0.673e-18■■□□□ 13.6
HMGB2-203ENST00000446922 ZNF296Q8WUU4 475 aaPredicted RBP19.25■□□□□ 0.67
HMGB2-203ENST00000446922 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
HMGB2-203ENST00000446922 FAM163AQ96GL9 167 aaPredicted RBP19.25■□□□□ 0.67
HMGB2-203ENST00000446922 CSADQ9Y600 493 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms