RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PKN1Q16512 942 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 C8orf34Q49A92 452 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 ZNF438Q7Z4V0 828 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 AEBP1Q8IUX7 1158 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 GJD3Q8N144 294 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 FLCNQ8NFG4 579 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 POP1Q99575 1024 aaKnown RBP5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 ELP3Q9H9T3 547 aa5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 ABI2Q9NYB9 513 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 BIN2Q9UBW5 565 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P9-201ENST00000429856 KIF4AO95239 1232 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 NLRP12P59046 1061 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 ECM1Q16610 540 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 SGO2Q562F6 1265 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 ZNF648Q5T619 568 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 CEP120Q8N960 986 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 PMEPA1Q969W9 287 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 CYP4F12Q9HCS2 524 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 CCDC87Q9NVE4 849 aa5.17□□□□□ -1.58
HMGB1P9-201ENST00000429856 FARP2O94887 1054 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 NEFLP07196 543 aa5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 DUSP27Q5VZP5 1158 aa5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 SNX29Q8TEQ0 813 aa5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 SLC7A3Q8WY07 619 aa5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 GGNBP2Q9H3C7 697 aa5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 DCTN4Q9UJW0 460 aa5.16□□□□□ -1.58
HMGB1P9-201ENST00000429856 C19orf57Q0VDD7 668 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 COL19A1Q14993 1142 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZNF124Q15973 351 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 NFXL1Q6ZNB6 911 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 SMG8Q8ND04 991 aaKnown RBP5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 DMRTB1Q96MA1 342 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 YIPF2Q9BWQ6 316 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 RBCK1Q9BYM8 510 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 SUGCTQ9HAC7 445 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 TMEM63CQ9P1W3 806 aa5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 CCDC9Q9Y3X0 531 aaKnown RBP5.15□□□□□ -1.59
HMGB1P9-201ENST00000429856 PHACTR2O75167 634 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 TNFRSF21O75509 655 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 CES1P23141 567 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 CYP27A1Q02318 531 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 ADAMTSL4Q6UY14 1074 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 KSR1Q8IVT5 923 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 TBC1D32Q96NH3 1257 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 FAM129BQ96TA1 746 aa5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 PAK6Q9NQU5 681 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P9-201ENST00000429856 A6NHS1 94 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 PAPLNO95428 1278 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 SND1Q7KZF4 910 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZAR1Q86SH2 424 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 TMC1Q8TDI8 760 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 FBLIM1Q8WUP2 373 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 SLC38A3Q99624 504 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 TMPRSS13Q9BYE2 586 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 SLC5A6Q9Y289 635 aa5.13□□□□□ -1.59
HMGB1P9-201ENST00000429856 EIF4EBP3O60516 100 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 MAPK1P28482 360 aa5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 EXOSC6Q5RKV6 272 aaKnown RBP5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 SPOCD1Q6ZMY3 1216 aa5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZSCAN29Q8IWY8 852 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 SHISA5Q8N114 240 aa5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 C1orf127Q8N9H9 656 aa5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 ALKBH8Q96BT7 664 aaKnown RBP5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 CNTN3Q9P232 1028 aa5.12□□□□□ -1.59
HMGB1P9-201ENST00000429856 PDE2AO00408 941 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 TIAF1O95411 115 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 CYP2E1P05181 493 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 EDN3P14138 238 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 ADMP35318 185 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 PLCL1Q15111 1095 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 USP26Q9BXU7 913 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 DNAJC25Q9H1X3 360 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 CHRDQ9H2X0 955 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 LRRC4CQ9HCJ2 640 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 KANSL3Q9P2N6 904 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 PRKAG2Q9UGJ0 569 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 SALL4Q9UJQ4 1053 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 AMOTL2Q9Y2J4 779 aa5.11□□□□□ -1.59
HMGB1P9-201ENST00000429856 FAM170BA6NMN3 283 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 GPR182O15218 404 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 DRD2P14416 443 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 IKBKEQ14164 716 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 CDPF1Q6NVV7 123 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 TMC7Q7Z402 723 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 STK11IPQ8N1F8 1099 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 TMEM40Q8WWA1 233 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZFYVE28Q9HCC9 887 aa5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZC3H7BQ9UGR2 993 aaKnown RBP5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 FOXD3Q9UJU5 478 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P9-201ENST00000429856 SOX1O00570 391 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 EREGO14944 169 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 CPNE3O75131 537 aaKnown RBP5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 IGHA2P01877 340 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 SOX4Q06945 474 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 MAP7Q14244 749 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZNF792Q3KQV3 632 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 ATG4DQ86TL0 474 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 RGS22Q8NE09 1264 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms