RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 SALL4Q9UJQ4 1053 aa9.09□□□□□ -0.95
CSNK2A1-204ENST00000400227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.09□□□□□ -0.95
CSNK2A1-204ENST00000400227 GNB5O14775 395 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 EREGO14944 169 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 LILRB5O75023 590 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 COL9A3Q14050 684 aaPredicted RBP9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 NCAPG2Q86XI2 1143 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 PLD4Q96BZ4 506 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 SMG9Q9H0W8 520 aaKnown RBP9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 ZFYVE28Q9HCC9 887 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 GPRASP1Q5JY77 1395 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 SMG6Q86US8 1419 aaKnown RBP9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 ATP10AO60312 1499 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 A2MP01023 1474 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 ABCC1P33527 1531 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 PIK3R2O00459 728 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 IRX6P78412 446 aaPredicted RBP9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 CEP120Q8N960 986 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 DCAF11Q8TEB1 546 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
CSNK2A1-204ENST00000400227 CCDC144AA2RUR9 1427 aa9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 PLCH2O75038 1416 aa9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 EIF2AK4Q9P2K8 1649 aaKnown RBP9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 RNF225M0QZC1 329 aaPredicted RBP9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 AFF1P51825 1210 aaKnown RBP9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 ASB16Q96NS5 453 aa9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
CSNK2A1-204ENST00000400227 ERBINQ96RT1 1412 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 NID1P14543 1247 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 ORC1Q13415 861 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 GRIK5Q16478 980 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 TRIM11Q96F44 468 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 POLR3GLQ9BT43 218 aa9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 KTN1Q86UP2 1357 aaKnown RBP9.06□□□□□ -0.96
CSNK2A1-204ENST00000400227 TREHO43280 583 aa9.05□□□□□ -0.96
CSNK2A1-204ENST00000400227 DSC3Q14574 896 aa9.05□□□□□ -0.96
CSNK2A1-204ENST00000400227 PNISRQ8TF01 805 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-204ENST00000400227 LRPPRCP42704 1394 aaKnown RBP9.05□□□□□ -0.96
CSNK2A1-204ENST00000400227 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
CSNK2A1-204ENST00000400227 CPNE3O75131 537 aaKnown RBP9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 EDN3P14138 238 aa9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 ATP11AP98196 1134 aa9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 DNAJC25Q9H1X3 360 aa9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 RASSF4Q9H2L5 321 aa9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 RNF123Q5XPI4 1314 aa9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 BRD4O60885 1362 aaPredicted RBP9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 COL17A1Q9UMD9 1497 aaPredicted RBP9.04□□□□□ -0.96
CSNK2A1-204ENST00000400227 RALBP1Q15311 655 aa9.03□□□□□ -0.96
CSNK2A1-204ENST00000400227 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
CSNK2A1-204ENST00000400227 PBX4Q9BYU1 374 aa9.03□□□□□ -0.96
CSNK2A1-204ENST00000400227 CEP152O94986 1710 aa9.03□□□□□ -0.96
CSNK2A1-204ENST00000400227 DEPDC5O75140 1603 aa9.03□□□□□ -0.96
CSNK2A1-204ENST00000400227 TRAPPC8Q9Y2L5 1435 aa9.03□□□□□ -0.96
CSNK2A1-204ENST00000400227 MYBBP1AQ9BQG0 1328 aaKnown RBP9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 EIF1AYO14602 144 aaKnown RBP9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 POLR3DP05423 398 aaPredicted RBP9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 ACPPP15309 386 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 IRS1P35568 1242 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 PLCB3Q01970 1234 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 KCNMA1Q12791 1236 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 EFCAB2Q5VUJ9 269 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 GALNT12Q8IXK2 581 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 CSRNP1Q96S65 589 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 PLVAPQ9BX97 442 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 SUV39H2Q9H5I1 410 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 DZANK1Q9NVP4 752 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 NOP53Q9NZM5 478 aaKnown RBP9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 NUDCQ9Y266 331 aa9.02□□□□□ -0.96
CSNK2A1-204ENST00000400227 PARD3Q8TEW0 1356 aa9.02□□□□□ -0.97
CSNK2A1-204ENST00000400227 CEP135Q66GS9 1140 aa9.02□□□□□ -0.97
CSNK2A1-204ENST00000400227 ILDR2Q71H61 639 aa9.02□□□□□ -0.97
CSNK2A1-204ENST00000400227 ANP32EQ9BTT0 268 aa9.02□□□□□ -0.97
CSNK2A1-204ENST00000400227 TRIM33Q9UPN9 1127 aa9.02□□□□□ -0.97
CSNK2A1-204ENST00000400227 SPHKAPQ2M3C7 1700 aa9.02□□□□□ -0.97
CSNK2A1-204ENST00000400227 IQGAP1P46940 1657 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 MADDQ8WXG6 1647 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 ZFYVE16Q7Z3T8 1539 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 RTEL1-TNFRSF6BF6WH68 1400 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 NFKBIEO00221 500 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 PEAR1Q5VY43 1037 aaPredicted RBP9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 GDF6Q6KF10 455 aaPredicted RBP9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 CACTIN-AS1Q8N1I8 211 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 TESK2Q96S53 571 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 OSMRQ99650 979 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 ZKSCAN3Q9BRR0 538 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 LATS2Q9NRM7 1088 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 ABCA9Q8IUA7 1624 aa9.01□□□□□ -0.97
CSNK2A1-204ENST00000400227 TET3O43151 1660 aa9□□□□□ -0.97
CSNK2A1-204ENST00000400227 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
CSNK2A1-204ENST00000400227 COL8A1P27658 744 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms