RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 VAMP1P23763 118 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 SMARCA1P28370 1054 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 PIK3CAP42336 1068 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 TBC1D8BQ0IIM8 1120 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 COX10Q12887 443 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 SEPT7Q16181 437 aaKnown RBP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 COBLL1Q53SF7 1204 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 MYSM1Q5VVJ2 828 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 PDXDC1Q6P996 788 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 BRICD5Q6PL45 260 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 CLASRPQ8N2M8 674 aaKnown RBP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 CHCHD4Q8N4Q1 142 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 NGDNQ8NEJ9 315 aaKnown RBP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 GAS2L2Q8NHY3 880 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 GABPB2Q8TAK5 448 aaPredicted RBP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 ERMNQ8TAM6 284 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 FAM76AQ8TAV0 307 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 ZNF483Q8TF39 744 aaPredicted RBP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 TCP11Q8WWU5 503 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 NACA2Q9H009 215 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 POGKQ9P215 609 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 SLC27A5Q9Y2P5 690 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 TBX22Q9Y458 520 aa5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 THOC2Q8NI27 1593 aaKnown RBP5.36□□□□□ -1.55
TNFRSF17-202ENST00000396495 TIAM1Q13009 1591 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 FYCO1Q9BQS8 1478 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 PTPRGP23470 1445 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 AKNAQ7Z591 1439 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CASKIN1Q8WXD9 1431 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 KIAA1107Q9UPP5 1409 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 SOS1Q07889 1333 aaPredicted RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 PDLIM1O00151 329 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CLASP2O75122 1294 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 ZBED4O75132 1171 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 FCHSD2O94868 740 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 SASH1O94885 1247 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 SNUPNO95149 360 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CSB-PGBD3P0DP91 1061 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CCNCP24863 283 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 YY1P25490 414 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 PDE4BQ07343 736 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 FUT2Q10981 343 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 UBE4AQ14139 1066 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 E2F4Q16254 413 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CNGA3Q16281 694 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CCDC158Q5M9N0 1113 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 TTC39BQ5VTQ0 682 aaPredicted RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 ZNF385CQ66K41 422 aaPredicted RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 SDE2Q6IQ49 451 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 RELL1Q8IUW5 271 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 IQUBQ8NA54 791 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 RDH13Q8NBN7 331 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 EHBP1Q8NDI1 1231 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 RTF1Q92541 710 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 VMP1Q96GC9 406 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 RBM17Q96I25 401 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 RSRC1Q96IZ7 334 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 FAM81BQ96LP2 452 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 PDGFDQ9GZP0 370 aaPredicted RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 GRPEL1Q9HAV7 217 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 CUEDC1Q9NWM3 386 aaPredicted RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 MKS1Q9NXB0 559 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 TBC1D7Q9P0N9 293 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 C6orf203Q9P0P8 240 aaPredicted RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 POLKQ9UBT6 870 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 DDX41Q9UJV9 622 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 ASAP1Q9ULH1 1129 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 PRR12Q9ULL5 1215 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 USTQ9Y2C2 406 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 R3HCC1Q9Y3T6 440 aaKnown RBP5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 IVNS1ABPQ9Y6Y0 642 aa5.35□□□□□ -1.55
TNFRSF17-202ENST00000396495 GRIN2BQ13224 1484 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 FMN1Q68DA7 1419 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 PLEKHG2Q9H7P9 1386 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 NPC1L1Q9UHC9 1359 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 EVC2Q86UK5 1308 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 MYO1CO00159 1063 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 RBP3P10745 1247 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 PECAM1P16284 738 aaPredicted RBP5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 ZNF16P17020 682 aaPredicted RBP5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 MAGEA9P43362 315 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 MMP16P51512 607 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 ZNF131P52739 623 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 HNRNPH2P55795 449 aaKnown RBP5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 TRIM29Q14134 588 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 BECN1Q14457 450 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 SKIV2LQ15477 1246 aaKnown RBP5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 LONRF1Q17RB8 773 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 KIAA0753Q2KHM9 967 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 Q3C1V9 767 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 CCDC144BQ3MJ40 725 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 KBTBD12Q3ZCT8 623 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 CCDC122Q5T0U0 273 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 AGAP9Q5VTM2 703 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 MMS22LQ6ZRQ5 1243 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 CCDC186Q7Z3E2 898 aa5.34□□□□□ -1.55
TNFRSF17-202ENST00000396495 CCDC144CPQ8IYA2 1237 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms