RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 MCOLN1Q9GZU1 580 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 SIL1Q9H173 461 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 VEZTQ9HBM0 779 aa20.22■□□□□ 0.83
CXCL12-206ENST00000395795 USP2O75604 605 aaPredicted RBP20.21■□□□□ 0.83
CXCL12-206ENST00000395795 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
CXCL12-206ENST00000395795 RBM5P52756 815 aaKnown RBP eCLIP20.21■□□□□ 0.83
CXCL12-206ENST00000395795 SPRYD7Q5W111 196 aa20.21■□□□□ 0.83
CXCL12-206ENST00000395795 DIEXFQ68CQ4 756 aaKnown RBP20.21■□□□□ 0.83
CXCL12-206ENST00000395795 APOBEC3HQ6NTF7 200 aaKnown RBP20.21■□□□□ 0.83
CXCL12-206ENST00000395795 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
CXCL12-206ENST00000395795 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
CXCL12-206ENST00000395795 TBC1D22AQ8WUA7 517 aa20.21■□□□□ 0.83
CXCL12-206ENST00000395795 MRIQ9BWK5 157 aa20.21■□□□□ 0.83
CXCL12-206ENST00000395795 ZBTB22O15209 634 aa20.2■□□□□ 0.82
CXCL12-206ENST00000395795 MYO1BO43795 1136 aa20.2■□□□□ 0.82
CXCL12-206ENST00000395795 MKRN3Q13064 507 aaKnown RBP20.2■□□□□ 0.82
CXCL12-206ENST00000395795 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
CXCL12-206ENST00000395795 LAMB1P07942 1786 aa20.19■□□□□ 0.82
CXCL12-206ENST00000395795 SLC5A1P13866 664 aa20.19■□□□□ 0.82
CXCL12-206ENST00000395795 GJA5P36382 358 aa20.19■□□□□ 0.82
CXCL12-206ENST00000395795 ZDHHC15Q96MV8 337 aa20.19■□□□□ 0.82
CXCL12-206ENST00000395795 R3HDMLQ9H3Y0 253 aa20.19■□□□□ 0.82
CXCL12-206ENST00000395795 ADORA1P30542 326 aa20.18■□□□□ 0.82
CXCL12-206ENST00000395795 IL15P40933 162 aaPredicted RBP20.18■□□□□ 0.82
CXCL12-206ENST00000395795 ATP2B3Q16720 1220 aa20.18■□□□□ 0.82
CXCL12-206ENST00000395795 TMEM39BQ9GZU3 492 aa20.18■□□□□ 0.82
CXCL12-206ENST00000395795 SUGT1Q9Y2Z0 365 aa20.18■□□□□ 0.82
CXCL12-206ENST00000395795 OTOFQ9HC10 1997 aa20.17■□□□□ 0.82
CXCL12-206ENST00000395795 PHKA1P46020 1223 aa20.17■□□□□ 0.82
CXCL12-206ENST00000395795 CACNB3P54284 484 aa20.17■□□□□ 0.82
CXCL12-206ENST00000395795 SUPT20HL1Q3ZLR7 823 aa20.17■□□□□ 0.82
CXCL12-206ENST00000395795 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
CXCL12-206ENST00000395795 UNCXA6NJT0 531 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 TCP10L2B9ZVM9 353 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 GNAI3P08754 354 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
CXCL12-206ENST00000395795 HHIPL2Q6UWX4 724 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 WNK4Q96J92 1243 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 CFHR5Q9BXR6 569 aa20.16■□□□□ 0.82
CXCL12-206ENST00000395795 PPP1R12BO60237 982 aaPredicted RBP20.15■□□□□ 0.82
CXCL12-206ENST00000395795 TBC1D8O95759 1140 aa20.15■□□□□ 0.82
CXCL12-206ENST00000395795 DGKZQ13574 1117 aa20.15■□□□□ 0.82
CXCL12-206ENST00000395795 TNFAIP1Q13829 316 aa20.15■□□□□ 0.82
CXCL12-206ENST00000395795 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.15■□□□□ 0.82
CXCL12-206ENST00000395795 CLUAP1Q96AJ1 413 aa20.15■□□□□ 0.82
CXCL12-206ENST00000395795 SLC10A4Q96EP9 437 aa20.15■□□□□ 0.82
CXCL12-206ENST00000395795 SALL1Q9NSC2 1324 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 PNMA6EA0A0J9YXQ4 647 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 IPO8O15397 1037 aaKnown RBP20.14■□□□□ 0.81
CXCL12-206ENST00000395795 SRGAP3O43295 1099 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 FRAT2O75474 233 aaPredicted RBP20.14■□□□□ 0.81
CXCL12-206ENST00000395795 PRDX5P30044 214 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 TMEM57Q8N5G2 664 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 WDR66Q8TBY9 1149 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 FRAT1Q92837 279 aaPredicted RBP20.14■□□□□ 0.81
CXCL12-206ENST00000395795 HDAC5Q9UQL6 1122 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 MYH13Q9UKX3 1938 aa20.14■□□□□ 0.81
CXCL12-206ENST00000395795 IGF2BP3O00425 579 aaKnown RBP eCLIP20.13■□□□□ 0.81
CXCL12-206ENST00000395795 ZBTB48P10074 688 aaPredicted RBP20.13■□□□□ 0.81
CXCL12-206ENST00000395795 TIMM10P62072 90 aa20.13■□□□□ 0.81
CXCL12-206ENST00000395795 DIXDC1Q155Q3 683 aa20.13■□□□□ 0.81
CXCL12-206ENST00000395795 NOM1Q5C9Z4 860 aaKnown RBP20.13■□□□□ 0.81
CXCL12-206ENST00000395795 FKBP1CQ5VVH2 108 aa20.13■□□□□ 0.81
CXCL12-206ENST00000395795 CCDC102BQ68D86 513 aa20.13■□□□□ 0.81
CXCL12-206ENST00000395795 DAGLAQ9Y4D2 1042 aa20.13■□□□□ 0.81
CXCL12-206ENST00000395795 RLBP1P12271 317 aa20.12■□□□□ 0.81
CXCL12-206ENST00000395795 TFCP2Q12800 502 aa20.12■□□□□ 0.81
CXCL12-206ENST00000395795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.12■□□□□ 0.81
CXCL12-206ENST00000395795 ZNF296Q8WUU4 475 aaPredicted RBP20.12■□□□□ 0.81
CXCL12-206ENST00000395795 MAST3O60307 1309 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
CXCL12-206ENST00000395795 SREBF2Q12772 1141 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 IFNL1Q8IU54 200 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 ANKRD13AQ8IZ07 590 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 CNKSR2Q8WXI2 1034 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 PTPN18Q99952 460 aa20.11■□□□□ 0.81
CXCL12-206ENST00000395795 TESPA1A2RU30 521 aaPredicted RBP20.1■□□□□ 0.81
CXCL12-206ENST00000395795 MANSC4A6NHS7 340 aaPredicted RBP20.1■□□□□ 0.81
CXCL12-206ENST00000395795 GPR25O00155 361 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 SEMA3EO15041 775 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 GNAI2P04899 355 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 RGS19P49795 217 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 RASGRF1Q13972 1273 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 ZKSCAN2Q63HK3 967 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 CDC42EP5Q6NZY7 148 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 MS4A4AQ96JQ5 239 aa20.1■□□□□ 0.81
CXCL12-206ENST00000395795 RPAP1Q9BWH6 1393 aaPredicted RBP20.09■□□□□ 0.81
CXCL12-206ENST00000395795 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 CCDC85CA6NKD9 419 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 NFIAQ12857 509 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 VGLL4Q14135 290 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 POLA2Q14181 598 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 CTU1Q7Z7A3 348 aaKnown RBP20.09■□□□□ 0.81
CXCL12-206ENST00000395795 ZNF384Q8TF68 577 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 XAGE2Q96GT9 111 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 ELP3Q9H9T3 547 aa20.09■□□□□ 0.81
CXCL12-206ENST00000395795 DENND2AQ9ULE3 1009 aa20.09■□□□□ 0.81
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