RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 LNPKQ9C0E8 428 aa7.95□□□□□ -1.14
SSX3-203ENST00000376895 ADAMTS1Q9UHI8 967 aa7.95□□□□□ -1.14
SSX3-203ENST00000376895 PRR12Q9ULL5 1215 aa7.95□□□□□ -1.14
SSX3-203ENST00000376895 FGD6Q6ZV73 1430 aa7.95□□□□□ -1.14
SSX3-203ENST00000376895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSX3-203ENST00000376895 A0A096LPE4 126 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 A0A1W2PPZ6 126 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 MINDY4BA8MYZ0 360 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 F6X3S4 739 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 PDE2AO00408 941 aaPredicted RBP7.94□□□□□ -1.14
SSX3-203ENST00000376895 TRPA1O75762 1119 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 HNRNPMP52272 730 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSX3-203ENST00000376895 MLLT1Q03111 559 aaPredicted RBP7.94□□□□□ -1.14
SSX3-203ENST00000376895 RPS26P11Q5JNZ5 115 aaPredicted RBP7.94□□□□□ -1.14
SSX3-203ENST00000376895 SOGA3Q5TF21 947 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 SEC16BQ96JE7 1060 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 HHIPQ96QV1 700 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 UBE2OQ9C0C9 1292 aaKnown RBP7.94□□□□□ -1.14
SSX3-203ENST00000376895 ZNF576Q9H609 170 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 GPN3Q9UHW5 284 aaPredicted RBP7.94□□□□□ -1.14
SSX3-203ENST00000376895 DACH1Q9UI36 760 aa7.94□□□□□ -1.14
SSX3-203ENST00000376895 ZNF644Q9H582 1327 aaPredicted RBP7.94□□□□□ -1.14
SSX3-203ENST00000376895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSX3-203ENST00000376895 LOC102724428A0A0B4J2F2 783 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 CDC14CA4D256 554 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 NFKBIEO00221 500 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 SMARCA5O60264 1052 aaPredicted RBP7.93□□□□□ -1.14
SSX3-203ENST00000376895 SMNDC1O75940 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
SSX3-203ENST00000376895 EIF2AK2P19525 551 aaKnown RBP7.93□□□□□ -1.14
SSX3-203ENST00000376895 CANXP27824 592 aaKnown RBP7.93□□□□□ -1.14
SSX3-203ENST00000376895 SIK1P57059 783 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 TBC1D8BQ0IIM8 1120 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 PHC3Q8NDX5 983 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 PMFBP1Q8TBY8 1022 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 NXPE3Q969Y0 559 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 NECAB3Q96P71 396 aaPredicted RBP7.93□□□□□ -1.14
SSX3-203ENST00000376895 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 SUPT16HQ9Y5B9 1047 aaKnown RBP7.93□□□□□ -1.14
SSX3-203ENST00000376895 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
SSX3-203ENST00000376895 ARHGAP5Q13017 1502 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 GLI2P10070 1586 aa7.93□□□□□ -1.14
SSX3-203ENST00000376895 ENC1O14682 589 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 SSBP05455 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
SSX3-203ENST00000376895 ATP11AP98196 1134 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 SNAP47Q5SQN1 464 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 ZNF468Q5VIY5 522 aaPredicted RBP7.92□□□□□ -1.14
SSX3-203ENST00000376895 IGFLR1Q9H665 355 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 SEC31BQ9NQW1 1179 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 KCNQ5Q9NR82 932 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 DNAJB12Q9NXW2 375 aaKnown RBP7.92□□□□□ -1.14
SSX3-203ENST00000376895 PLEKHH2Q8IVE3 1493 aa7.92□□□□□ -1.14
SSX3-203ENST00000376895 J3QW42 95 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 GPR25O00155 361 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 RPS26P62854 115 aaKnown RBP7.91□□□□□ -1.14
SSX3-203ENST00000376895 LMNB2Q03252 620 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 TTBK2Q6IQ55 1244 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 HFE2Q6ZVN8 426 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 SYT9Q86SS6 491 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 ZNF296Q8WUU4 475 aaPredicted RBP7.91□□□□□ -1.14
SSX3-203ENST00000376895 STRIP2Q9ULQ0 834 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 FANCAO15360 1455 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 ABCA9Q8IUA7 1624 aa7.91□□□□□ -1.14
SSX3-203ENST00000376895 TTC37Q6PGP7 1564 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 ARAP3Q8WWN8 1544 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 TEX14Q8IWB6 1497 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 AKNAQ7Z591 1439 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 KIAA1107Q9UPP5 1409 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 ZBTB42B2RXF5 422 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 SIN3BO75182 1162 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 BMP4P12644 408 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 LMNB1P20700 586 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
SSX3-203ENST00000376895 CTBSQ01459 385 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 RBL2Q08999 1139 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 COL9A2Q14055 689 aaPredicted RBP7.9□□□□□ -1.14
SSX3-203ENST00000376895 AGMOQ6ZNB7 445 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 NOP9Q86U38 636 aaKnown RBP7.9□□□□□ -1.14
SSX3-203ENST00000376895 CKAP2LQ8IYA6 745 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 EAF1Q96JC9 268 aaPredicted RBP7.9□□□□□ -1.14
SSX3-203ENST00000376895 NT5C1AQ9BXI3 368 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
SSX3-203ENST00000376895 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.14
SSX3-203ENST00000376895 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 SAMM50Q9Y512 469 aa7.9□□□□□ -1.14
SSX3-203ENST00000376895 ITSN2Q9NZM3 1697 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 DIP2BQ9P265 1576 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
SSX3-203ENST00000376895 NEO1Q92859 1461 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 SCAPERQ9BY12 1400 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 PF4P02776 101 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 FAM160A1Q05DH4 1040 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
SSX3-203ENST00000376895 CAMK2GQ13555 558 aaPredicted RBP7.89□□□□□ -1.15
SSX3-203ENST00000376895 CCDC144BQ3MJ40 725 aa7.89□□□□□ -1.15
SSX3-203ENST00000376895 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms