RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 AIDAQ96BJ3 306 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 ZNF652Q9Y2D9 606 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 DOT1LQ8TEK3 1739 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 SLIT2O94813 1529 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 SPATA31A1Q5TZJ5 1347 aa21.09■□□□□ 0.97
CD40-201ENST00000372276 PATL2C9JE40 543 aaKnown RBP21.09■□□□□ 0.97
CD40-201ENST00000372276 IGHMBP2P38935 993 aaKnown RBP21.09■□□□□ 0.97
CD40-201ENST00000372276 ADALQ6DHV7 355 aa21.09■□□□□ 0.97
CD40-201ENST00000372276 SYNE4Q8N205 404 aa21.09■□□□□ 0.97
CD40-201ENST00000372276 NCOA5Q9HCD5 579 aaKnown RBP21.09■□□□□ 0.97
CD40-201ENST00000372276 POLR3EQ9NVU0 708 aa21.09■□□□□ 0.97
CD40-201ENST00000372276 ORC3Q9UBD5 711 aaPredicted RBP21.09■□□□□ 0.97
CD40-201ENST00000372276 UBN2Q6ZU65 1347 aa21.09■□□□□ 0.97
CD40-201ENST00000372276 ZNF532Q9HCE3 1301 aa21.09■□□□□ 0.97
CD40-201ENST00000372276 DTNBO60941 627 aa21.08■□□□□ 0.97
CD40-201ENST00000372276 IDH1O75874 414 aaKnown RBP21.08■□□□□ 0.97
CD40-201ENST00000372276 FDPSP14324 419 aaKnown RBP21.08■□□□□ 0.97
CD40-201ENST00000372276 HAND2P61296 217 aa21.08■□□□□ 0.97
CD40-201ENST00000372276 STX1AQ16623 288 aa21.08■□□□□ 0.97
CD40-201ENST00000372276 ANO6Q4KMQ2 910 aa21.08■□□□□ 0.97
CD40-201ENST00000372276 INTS5Q6P9B9 1019 aaKnown RBP21.08■□□□□ 0.97
CD40-201ENST00000372276 SPATA5Q8NB90 893 aa21.08■□□□□ 0.97
CD40-201ENST00000372276 CDC5LQ99459 802 aaKnown RBP21.08■□□□□ 0.97
CD40-201ENST00000372276 PIH1D3Q9NQM4 214 aaKnown RBP21.08■□□□□ 0.97
CD40-201ENST00000372276 USP28Q96RU2 1077 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 STRBPQ96SI9 672 aaKnown RBP21.07■□□□□ 0.96
CD40-201ENST00000372276 CBX8Q9HC52 389 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 USP21Q9UK80 565 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 TCRBV5S4A2TA0A5A2 114 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 APPP05067 770 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 PHKA1P46020 1223 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 ZNF165P49910 485 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 ANTXR2P58335 489 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 SYNE3Q6ZMZ3 975 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 CHST3Q7LGC8 479 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 CKAP2LQ8IYA6 745 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 NACAP1Q9BZK3 213 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 KRT23Q9C075 422 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 ANO10Q9NW15 660 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 HPS5Q9UPZ3 1129 aa21.07■□□□□ 0.96
CD40-201ENST00000372276 LAMB2P55268 1798 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 A0A0G2JLW4 131 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 ATP6V1AP38606 617 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 LIFRP42702 1097 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 ME1P48163 572 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 PLCB2Q00722 1185 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 SUSD4Q5VX71 490 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 BARGINQ6ZT62 677 aa21.06■□□□□ 0.96
CD40-201ENST00000372276 MRPS27Q92552 414 aaKnown RBP21.06■□□□□ 0.96
CD40-201ENST00000372276 NAT10Q9H0A0 1025 aaKnown RBP21.06■□□□□ 0.96
CD40-201ENST00000372276 DOCK2Q92608 1830 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 LOC102724428A0A0B4J2F2 783 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 SH2B2O14492 632 aaPredicted RBP21.05■□□□□ 0.96
CD40-201ENST00000372276 CDC25BP30305 580 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 CRKLP46109 303 aaKnown RBP21.05■□□□□ 0.96
CD40-201ENST00000372276 SIK1P57059 783 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 SF3A1Q15459 793 aaKnown RBP21.05■□□□□ 0.96
CD40-201ENST00000372276 POTEAQ6S8J7 498 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 PI16Q6UXB8 463 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 SGMS1Q86VZ5 419 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 ENGASEQ8NFI3 743 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 WASF1Q92558 559 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 SPTLC3Q9NUV7 552 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 ZNF831Q5JPB2 1677 aa21.05■□□□□ 0.96
CD40-201ENST00000372276 GOLGA6L19H0YKK7 550 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 CAMTA2O94983 1202 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 METAP2P50579 478 aaKnown RBP eCLIP21.04■□□□□ 0.96
CD40-201ENST00000372276 NOLC1Q14978 699 aaKnown RBP eCLIP21.04■□□□□ 0.96
CD40-201ENST00000372276 STK38Q15208 465 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 TMTC2Q8N394 836 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 RCAN1P53805 252 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 SARM1Q6SZW1 724 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 JMYQ8N9B5 988 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 LINC00301Q8NCQ3 95 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 PRIMPOLQ96LW4 560 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 NAPBQ9H115 298 aa21.04■□□□□ 0.96
CD40-201ENST00000372276 NRAPQ86VF7 1730 aa21.03■□□□□ 0.96
CD40-201ENST00000372276 SNW1Q13573 536 aaKnown RBP21.03■□□□□ 0.96
CD40-201ENST00000372276 SART3Q15020 963 aaKnown RBP21.03■□□□□ 0.96
CD40-201ENST00000372276 MYSM1Q5VVJ2 828 aa21.03■□□□□ 0.96
CD40-201ENST00000372276 FSIP1Q8NA03 581 aa21.03■□□□□ 0.96
CD40-201ENST00000372276 RNF41Q9H4P4 317 aaPredicted RBP21.03■□□□□ 0.96
CD40-201ENST00000372276 GNL3LQ9NVN8 582 aaKnown RBP21.03■□□□□ 0.96
CD40-201ENST00000372276 R3HCC1Q9Y3T6 440 aaKnown RBP21.03■□□□□ 0.96
CD40-201ENST00000372276 STK36Q9NRP7 1315 aa21.03■□□□□ 0.96
CD40-201ENST00000372276 RRP9O43818 475 aaKnown RBP21.02■□□□□ 0.96
CD40-201ENST00000372276 CEBPZQ03701 1054 aaKnown RBP21.02■□□□□ 0.96
CD40-201ENST00000372276 TMED8Q6PL24 325 aaPredicted RBP21.02■□□□□ 0.96
CD40-201ENST00000372276 IFNL3Q8IZI9 196 aa21.02■□□□□ 0.96
CD40-201ENST00000372276 QTRT2Q9H974 415 aaKnown RBP21.02■□□□□ 0.96
CD40-201ENST00000372276 TRPC5Q9UL62 973 aaPredicted RBP21.02■□□□□ 0.96
CD40-201ENST00000372276 SPTLC2O15270 562 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 ZBTB43O43298 467 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 TRIM29Q14134 588 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 DHX8Q14562 1220 aaKnown RBP21.01■□□□□ 0.95
CD40-201ENST00000372276 LUZP1Q86V48 1076 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 PLA2G4DQ86XP0 818 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms