RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Myl10Q62082 202 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Agtpbp1Q641K1 1218 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cdca8Q8BHX3 289 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Srek1Q8BZX4 494 aaKnown RBP18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Rbm43Q99J64 343 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Naa16Q9DBB4 864 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Zbtb7aO88939 569 aaKnown RBP18.14■□□□□ 0.49
Vcan-201ENSMUST00000109543 Hnrnpul1Q8VDM6 859 aaKnown RBP18.14■□□□□ 0.49
Vcan-201ENSMUST00000109543 Frmd7A2AD83 703 aa18.14■□□□□ 0.49
Vcan-201ENSMUST00000109543 Cspp1B2RX88 1205 aa18.14■□□□□ 0.49
Vcan-201ENSMUST00000109543 Smarcc1P97496 1104 aa18.14■□□□□ 0.49
Vcan-201ENSMUST00000109543 Ubxn4Q8VCH8 506 aa18.14■□□□□ 0.49
Vcan-201ENSMUST00000109543 Stox1B2RQL2 990 aa18.13■□□□□ 0.49
Vcan-201ENSMUST00000109543 CltaO08585 235 aa18.13■□□□□ 0.49
Vcan-201ENSMUST00000109543 Rtkn2Q14B46 604 aa18.13■□□□□ 0.49
Vcan-201ENSMUST00000109543 Tbc1d31Q6NXY1 996 aa18.13■□□□□ 0.49
Vcan-201ENSMUST00000109543 Stk38Q91VJ4 465 aa18.13■□□□□ 0.49
Vcan-201ENSMUST00000109543 Nhsl1Q8CAF4 1587 aa18.13■□□□□ 0.49
Vcan-201ENSMUST00000109543 Ccng2O08918 344 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Clec11aO88200 328 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Rrp1P56183 494 aaKnown RBP18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Mknk2Q8CDB0 459 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Bola3Q8CEI1 110 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Lrrc2Q8VDB8 371 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Pold4Q9CWP8 107 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Dusp10Q9ESS0 483 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Hmgn5Q9JL35 406 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Rps6ka4Q9Z2B9 773 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Slc4a4O88343 1079 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Llgl2Q3TJ91 1027 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Oxsr1Q6P9R2 527 aa18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Ccdc47Q9D024 483 aaKnown RBP18.12■□□□□ 0.49
Vcan-201ENSMUST00000109543 Pramel3A2AHA7 463 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Gm7903A2AWL1 463 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 AV320801A2AWL3 467 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Gm15023L7MUB4 467 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Kif3aP28741 701 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Casp1P29452 402 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Ccdc174Q3U155 467 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Acnat2Q8BGG9 420 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Q8BT18 775 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Plcd3Q8K2J0 785 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 CpvlQ9D3S9 478 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 CpdO89001 1377 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Rgs12Q8CGE9 1381 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Ube4aE9Q735 1028 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Tpm2P58774 284 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Gpr108Q91WD0 569 aa18.11■□□□□ 0.49
Vcan-201ENSMUST00000109543 Gimap8Q75N62 688 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Kcnf1Q7TSH7 493 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Sec62Q8BU14 398 aaKnown RBP18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Hps3Q91VB4 1002 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Telo2Q9DC40 840 aaKnown RBP18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Znfx1Q8R151 1909 aaKnown RBP18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Naaladl2A0A0N4SUJ3 795 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Npy5rO70342 466 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Gm28047Q3US59 414 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Cdkl5Q3UTQ8 938 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Olfm5Q8BU90 496 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 9230110C19RikQ8CC70 267 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Scn11aQ9R053 1765 aa18.1■□□□□ 0.49
Vcan-201ENSMUST00000109543 Stx1aO35526 288 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Cplx2P84086 134 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Sptlc2P97363 560 aaKnown RBP18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Cacna1sQ02789 1880 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Myh2G3UW82 1942 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Pde4bB1AWC9 736 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Atp1b3P97370 278 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 IntuQ059U7 942 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Slc44a1Q6X893 653 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Sept9Q80UG5 583 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Ranbp6Q8BIV3 1105 aa18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Nop14Q8R3N1 860 aaKnown RBP18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 Yeats4Q9CR11 227 aaKnown RBP18.09■□□□□ 0.49
Vcan-201ENSMUST00000109543 FAM186AQ9D9R9 1790 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Cnnm2Q3TWN3 875 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Cyp24a1Q64441 514 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Tsen34Q8BMZ5 316 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 CerkQ8K4Q7 531 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 HdlbpQ8VDJ3 1268 aaKnown RBP18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Rbm33Q9CXK9 1231 aaKnown RBP18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 ParvgQ9ERD8 331 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Gja10Q9WUS4 505 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Foxo3Q9WVH4 672 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Plch1Q4KWH5 1682 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Tcof1O08784 1320 aaKnown RBP18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Myh3P13541 1940 aa18.08■□□□□ 0.48
Vcan-201ENSMUST00000109543 Gm13023A2A8N2 498 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dnm1P39053 867 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Gnat2P50149 354 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Dnajc2P54103 621 aaKnown RBP18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Siah1aP61092 282 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Cplx1P63040 134 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Prkag3Q8BGM7 489 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Sirt2Q8VDQ8 389 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Suclg2Q9Z2I8 433 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Zbtb21E9Q444 1094 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Atp2b1G5E829 1220 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Cd3dP04235 173 aa18.07■□□□□ 0.48
Vcan-201ENSMUST00000109543 Slc7a3P70423 618 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms