RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 RAC3P60763 192 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 OR4C5Q8NGB2 326 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 OCC1Q8TAD7 63 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 SELENOKQ9Y6D0 94 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 R4GN57 208 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 COL5A1P20908 1838 aaPredicted RBP10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 IGHV1OR15-9A0A0B4J2B8 117 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 NTF4P34130 210 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 SLC23A3Q6PIS1 610 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 C17orf82Q86X59 251 aaPredicted RBP10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 ST6GALNAC3Q8NDV1 305 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 BORCS7Q96B45 105 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 TRAV24A0A0B4J272 114 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 ODAMA1E959 279 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 SH2D1BO14796 132 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 ZIC3O60481 467 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 RAMP3O60896 148 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 ZNF253O75346 499 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 KMT5CQ86Y97 462 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 OR8I2Q8N0Y5 310 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 OR2D2Q9H210 308 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 PRDM6Q9NQX0 595 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 CA6P23280 308 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 TIMP3P35625 211 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 SSR4P51571 173 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 TCL1AP56279 114 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 CATR1Q13166 79 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 KLHDC1Q8N7A1 406 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 NINJ1Q92982 152 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 UHRF2Q96PU4 802 aa10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 SF3B5Q9BWJ5 86 aaKnown RBP10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 AKIRIN1Q9H9L7 192 aaPredicted RBP10.83□□□□□ -0.68
SFSWAP-209ENST00000540469 WNT2P09544 360 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 LHX2P50458 406 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 YPEL3P61236 119 aaPredicted RBP10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 RPEL1Q2QD12 228 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 FBXW9Q5XUX1 488 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 ABHD3Q8WU67 409 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 LRFN3Q9BTN0 628 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 NRN1Q9NPD7 142 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 IGLV3-12A0A075B6K2 115 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 TMPRSS2O15393 492 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 MRPL33O75394 65 aaKnown RBP10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 KRTCAP3Q53RY4 240 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 UNQ5815/PRO19632Q6UWF5 114 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 STRADBQ9C0K7 418 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 SERTAD4Q9NUC0 356 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
SFSWAP-209ENST00000540469 A0A1W2PR77 199 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 LRRC30A6NM36 301 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 TDGF1P13385 188 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 SRYQ05066 204 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 VAMP3Q15836 100 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 IGFBP7Q16270 282 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 SAXO1Q8IYX7 474 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 TCTEX1D1Q8N7M0 179 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 Q8NFD4 153 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 IL36BQ9NZH7 164 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 FREM1Q5H8C1 2179 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 YPEL1O60688 119 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 S1PR2O95136 353 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 ZNF738Q8NE65 137 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 YPEL2Q96QA6 119 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 C1QTNF5Q9BXJ0 243 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 FGF23Q9GZV9 251 aaPredicted RBP10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 HSPB7Q9UBY9 170 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 NGFP01138 241 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 CD1BP29016 333 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 GTF3C1Q12789 2109 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 MMD2Q8IY49 270 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 OR10D3Q8NH80 312 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 PRDM14Q9GZV8 571 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 CLEC1BQ9P126 229 aa10.81□□□□□ -0.68
SFSWAP-209ENST00000540469 TRBV20OR9-2A0A075B6H5 130 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 NXPH2O95156 264 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 REPIN1Q9BWE0 567 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 GAL3ST2Q9H3Q3 398 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 SLC45A2Q9UMX9 530 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 RHBDL1O75783 438 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 OTX2P32243 289 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 KLF3P57682 345 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 SELENOTP62341 195 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 RPL31P62899 125 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 GNG3P63215 75 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 PLP2Q04941 152 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 FAM19A2Q8N3H0 131 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 SSMEM1Q8WWF3 244 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 HEYLQ9NQ87 328 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 DMDP11532 3685 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 HYPMO75409 117 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 P04436 131 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms